The gene/protein map for NC_008819 is currently unavailable.
Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026171

Identifier: 124026171

GI number: 124026171

Start: 1172364

End: 1172687

Strand: Reverse

Name: 124026171

Synonym: NATL1_14641

Alternate gene names: NA

Gene position: 1172687-1172364 (Counterclockwise)

Preceding gene: 124026172

Following gene: 124026170

Centisome position: 62.89

GC content: 40.74

Gene sequence:

>324_bases
ATGGTTAAGAAATCTTCTTCGATTACAAAATCCAATTCTAATTGGTTATGGAGGTGGGCAGAACCTGAAAGCGAACTCTC
AGTAATTCCGAAATCAAAAACTAAACGCTTGGCCCAACAGGCAAAGTTGGCAAATGTTGATGCAGAGAGGGCTGTTACTA
GGGCATACCAAATTGAATTGTCAAGAACGAAGGCAATTGGAGAGGCAATGTTTAAGTCTGGAAAAGCATTGAGGTTTACT
CTTTCTAGTTCTGGAAGGCAGTTAATTCTCAGAACACAGGCAGCACGAAGGCAGTTTGAACCTGGTTTTAGGGATAAGAA
ATAA

Upstream 100 bases:

>100_bases
TTTTCATTTTTTTTTGGATTTTCAATCCTTTTTTCTTGCCTGTAGCGGTTAAGGTCTTTATGAGTCATCAAATGGCTCTT
CGTTTTATGGGAATGGGAGT

Downstream 100 bases:

>100_bases
TTTTCAGATAGAATAAAAGCCCTACGAAAAATAAAAAAATGCAGCTGTATATAGTTACTTGGAAATTCGAATCTTCTGAG
GATCAAAATTATTCATCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIELSRTKAIGEAMFKSGKALRFT
LSSSGRQLILRTQAARRQFEPGFRDKK

Sequences:

>Translated_107_residues
MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIELSRTKAIGEAMFKSGKALRFT
LSSSGRQLILRTQAARRQFEPGFRDKK
>Mature_107_residues
MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIELSRTKAIGEAMFKSGKALRFT
LSSSGRQLILRTQAARRQFEPGFRDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12184; Mature: 12184

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIEL
CCCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SRTKAIGEAMFKSGKALRFTLSSSGRQLILRTQAARRQFEPGFRDKK
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIEL
CCCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SRTKAIGEAMFKSGKALRFTLSSSGRQLILRTQAARRQFEPGFRDKK
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA