| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026106
Identifier: 124026106
GI number: 124026106
Start: 1142819
End: 1143259
Strand: Direct
Name: 124026106
Synonym: NATL1_13991
Alternate gene names: NA
Gene position: 1142819-1143259 (Clockwise)
Preceding gene: 124026105
Following gene: 124026107
Centisome position: 61.29
GC content: 41.27
Gene sequence:
>441_bases ATGCTTCAAAAGATCTTCAGTCTTATAGCCTTTATGGCTTTTTCATTGATGAGTTATGCACCTAGTGCTATTGCAGTTGA AGATAAACCCCCTGTAGATGTACAAGAACTTTTCACAAGCACAAAGCCAATTTATGGAGAGTCATTTACATATCCTGAAG GTAAAGGAGAAATGCGTCTTTATAAAGTTGATGTTCAACCAGGTGGTGTTGTCCCCCTTCATTTTCATGAGGCACCCTTA ACCAGCTATATCGAAGAGGGTCAATTAACGCTGAAGACGAAGAAAGGTAAGAGCACAACTTTTCGTGAGGGAGATTCTTT TGTATTGTCAGCTGATACTCCTCCTCATACCATGGCGAATAATGGAAAAGTACCAGCAGTCATGTGGGTAACTGTTGCTG CAGCTGAGGGAGTTCCTACTCTCACCAATGTTGAAGGATAA
Upstream 100 bases:
>100_bases AAAACTTAGAACAAATAAAAAGTTCAACTAATCGTGTATTAATTCTGACTTCCCGAATTCTCTACAGGGGATATGATTTA AATTCAAACTTTTAAAATTA
Downstream 100 bases:
>100_bases ATATTTTCGATTTCCACCATATTGATATTTCTATAACAGGGGCTGACTTCGGTCAGTCCTTTTTTGAGTAATACTCGAAG TAGCTAGATCTTCTCCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLQKIFSLIAFMAFSLMSYAPSAIAVEDKPPVDVQELFTSTKPIYGESFTYPEGKGEMRLYKVDVQPGGVVPLHFHEAPL TSYIEEGQLTLKTKKGKSTTFREGDSFVLSADTPPHTMANNGKVPAVMWVTVAAAEGVPTLTNVEG
Sequences:
>Translated_146_residues MLQKIFSLIAFMAFSLMSYAPSAIAVEDKPPVDVQELFTSTKPIYGESFTYPEGKGEMRLYKVDVQPGGVVPLHFHEAPL TSYIEEGQLTLKTKKGKSTTFREGDSFVLSADTPPHTMANNGKVPAVMWVTVAAAEGVPTLTNVEG >Mature_146_residues MLQKIFSLIAFMAFSLMSYAPSAIAVEDKPPVDVQELFTSTKPIYGESFTYPEGKGEMRLYKVDVQPGGVVPLHFHEAPL TSYIEEGQLTLKTKKGKSTTFREGDSFVLSADTPPHTMANNGKVPAVMWVTVAAAEGVPTLTNVEG
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15870; Mature: 15870
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQKIFSLIAFMAFSLMSYAPSAIAVEDKPPVDVQELFTSTKPIYGESFTYPEGKGEMRL CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEE YKVDVQPGGVVPLHFHEAPLTSYIEEGQLTLKTKKGKSTTFREGDSFVLSADTPPHTMAN EEEECCCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCCEEECCCCEEEECCCCCCCCCC NGKVPAVMWVTVAAAEGVPTLTNVEG CCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLQKIFSLIAFMAFSLMSYAPSAIAVEDKPPVDVQELFTSTKPIYGESFTYPEGKGEMRL CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEE YKVDVQPGGVVPLHFHEAPLTSYIEEGQLTLKTKKGKSTTFREGDSFVLSADTPPHTMAN EEEECCCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCCEEECCCCEEEECCCCCCCCCC NGKVPAVMWVTVAAAEGVPTLTNVEG CCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA