| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026096
Identifier: 124026096
GI number: 124026096
Start: 1139475
End: 1139906
Strand: Reverse
Name: 124026096
Synonym: NATL1_13891
Alternate gene names: NA
Gene position: 1139906-1139475 (Counterclockwise)
Preceding gene: 124026097
Following gene: 124026095
Centisome position: 61.13
GC content: 40.74
Gene sequence:
>432_bases ATGCGACGCATTTTACTTCTTGCACTAACAGCAGGAATTTCTATCCCAATAGTTGCCTGTAGTCCAAAGAAGCAAACATC TATTGAACCAGTGGTAGTAGAAACTCTTATCAGTGCAACTGAATCGTGGAATGGAGATTCTTTTAAGTACCCGAGAGGGA AAGCAGAAATGAAACTTGAAAAAATAACTGCTCAAGCTGGTTTTAAAACACCTCTTCATTTACATCCACAGCCTGGGATT ATTTATGTTCAGAGAGGAACTCTTTATTGTGAAACCAGTGACGGACAATCACTGACATTAGGAGCTGGTGAAAGCTTCGC TTCATCTCAGGATACTGCTCATTATTGTCAAAACATAGGTGATGAAGAGATGGTGGTTTTTAGCGCCTCAGCAGGAGCTA AAGGTAAAAAGACCACTGTCCCGACTGAATAA
Upstream 100 bases:
>100_bases CAGGTAGGGCTAACCAGTTCGGGTTTTTATGTCATCCCTTTTTTAATAGATGTCTGATTGATCTAGATCAGCTATAACGA GCTGGTATTTATATAGCTTT
Downstream 100 bases:
>100_bases ATAAACGCTTTCTGATTGAATAAAGAAGGTCGACAGTCGATGGTCCTCTGAATAACAAGGGCTGATTTAGATCAGTCCTT TTCAAATATTCGTTTACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRRILLLALTAGISIPIVACSPKKQTSIEPVVVETLISATESWNGDSFKYPRGKAEMKLEKITAQAGFKTPLHLHPQPGI IYVQRGTLYCETSDGQSLTLGAGESFASSQDTAHYCQNIGDEEMVVFSASAGAKGKKTTVPTE
Sequences:
>Translated_143_residues MRRILLLALTAGISIPIVACSPKKQTSIEPVVVETLISATESWNGDSFKYPRGKAEMKLEKITAQAGFKTPLHLHPQPGI IYVQRGTLYCETSDGQSLTLGAGESFASSQDTAHYCQNIGDEEMVVFSASAGAKGKKTTVPTE >Mature_143_residues MRRILLLALTAGISIPIVACSPKKQTSIEPVVVETLISATESWNGDSFKYPRGKAEMKLEKITAQAGFKTPLHLHPQPGI IYVQRGTLYCETSDGQSLTLGAGESFASSQDTAHYCQNIGDEEMVVFSASAGAKGKKTTVPTE
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15345; Mature: 15345
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILLLALTAGISIPIVACSPKKQTSIEPVVVETLISATESWNGDSFKYPRGKAEMKLE CCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCHHHEE KITAQAGFKTPLHLHPQPGIIYVQRGTLYCETSDGQSLTLGAGESFASSQDTAHYCQNIG EHHHHCCCCCCEEECCCCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHCCC DEEMVVFSASAGAKGKKTTVPTE CCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRRILLLALTAGISIPIVACSPKKQTSIEPVVVETLISATESWNGDSFKYPRGKAEMKLE CCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCHHHEE KITAQAGFKTPLHLHPQPGIIYVQRGTLYCETSDGQSLTLGAGESFASSQDTAHYCQNIG EHHHHCCCCCCEEECCCCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHCCC DEEMVVFSASAGAKGKKTTVPTE CCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA