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The map label for this gene is yaeJ [C]

Identifier: 124026030

GI number: 124026030

Start: 1109709

End: 1110131

Strand: Reverse

Name: yaeJ [C]

Synonym: NATL1_13231

Alternate gene names: 124026030

Gene position: 1110131-1109709 (Counterclockwise)

Preceding gene: 124026031

Following gene: 124026029

Centisome position: 59.53

GC content: 33.81

Gene sequence:

>423_bases
ATGAATCTTAGGATTAATACTAAGCTTGAAATACCAGATAACGAAATTAAGTGGAGATTCTCTAGATCATCAGGAGCTGG
TGGACAGAACGTAAATAAGACAGACAGTCGAGCTGAAATTGTATTTAACGTATCTGAATCAAAAACTTTAACTCCATACC
AGAAATATAGGATCTCAATTCAGGATGAAGTCAAGCTCTCTAATGGTTGTATTTGTATAGCTGTTCAAGATAAAAGAACA
CAATATCAAAATAGACAATTAGCTTTAACTAGACTTACTTCAACCTTACGAGAGCTTTTAAAGCCACCTCCAAAGAAAAG
AAGAGAGACAATACCTACTCGCTCATCACAGAGGAAGAGAATTGAGTCAAAGAAGAAAAGAGGTGAATTAAAAAGGAATA
GGCAATCAAATATAGATTTTTAA

Upstream 100 bases:

>100_bases
TCAGTCATTCATGCTCTTTTCTCCGAATGAGATTAAAGAACCAAAAAAGACTAATCCATTAGAAATGAGCTCACTTCGAT
TAGCTGGATAAAGTAGACAA

Downstream 100 bases:

>100_bases
AAACTAAGTAAGGAATAGAACAAAATCGTTTAAAATAACAGTTATAGATGAAATCCAGGAATAGATAAGATTTTTCAACT
TAGCCCTTTTATCTGTTTAG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNLRINTKLEIPDNEIKWRFSRSSGAGGQNVNKTDSRAEIVFNVSESKTLTPYQKYRISIQDEVKLSNGCICIAVQDKRT
QYQNRQLALTRLTSTLRELLKPPPKKRRETIPTRSSQRKRIESKKKRGELKRNRQSNIDF

Sequences:

>Translated_140_residues
MNLRINTKLEIPDNEIKWRFSRSSGAGGQNVNKTDSRAEIVFNVSESKTLTPYQKYRISIQDEVKLSNGCICIAVQDKRT
QYQNRQLALTRLTSTLRELLKPPPKKRRETIPTRSSQRKRIESKKKRGELKRNRQSNIDF
>Mature_140_residues
MNLRINTKLEIPDNEIKWRFSRSSGAGGQNVNKTDSRAEIVFNVSESKTLTPYQKYRISIQDEVKLSNGCICIAVQDKRT
QYQNRQLALTRLTSTLRELLKPPPKKRRETIPTRSSQRKRIESKKKRGELKRNRQSNIDF

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=130, Percent_Identity=35.3846153846154, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16363; Mature: 16363

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRINTKLEIPDNEIKWRFSRSSGAGGQNVNKTDSRAEIVFNVSESKTLTPYQKYRISI
CCEEECCEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEEEE
QDEVKLSNGCICIAVQDKRTQYQNRQLALTRLTSTLRELLKPPPKKRRETIPTRSSQRKR
CCCEEECCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHH
IESKKKRGELKRNRQSNIDF
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLRINTKLEIPDNEIKWRFSRSSGAGGQNVNKTDSRAEIVFNVSESKTLTPYQKYRISI
CCEEECCEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEEEE
QDEVKLSNGCICIAVQDKRTQYQNRQLALTRLTSTLRELLKPPPKKRRETIPTRSSQRKR
CCCEEECCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHH
IESKKKRGELKRNRQSNIDF
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]