| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026016
Identifier: 124026016
GI number: 124026016
Start: 1104134
End: 1104256
Strand: Reverse
Name: 124026016
Synonym: NATL1_13091
Alternate gene names: NA
Gene position: 1104256-1104134 (Counterclockwise)
Preceding gene: 124026017
Following gene: 124026015
Centisome position: 59.22
GC content: 27.64
Gene sequence:
>123_bases ATGTCCATTACAGCTTTCTTGAAAAAAAAGATTTCTAAAATAAAAAAAAGGTTTGATGTGCAAAAAGTTCCAATGATGAT GCAGAAAGATCTAGAAACTATGGCTTATTTGAACAAGATTTAA
Upstream 100 bases:
>100_bases ATTTGTTTAGGGGGCATTAGCCCCCAATTTTTTGTTGGTAATTCTTACCGATTGAATCTTTTTGGTCTATCGATTTAATA GAAGCAAATTAAACGATTTT
Downstream 100 bases:
>100_bases AACGATATCACCCAGACATAAGCCAAACTTATAAATAAGAAAGTAAGGTAGATCTAGTTGAGCTTCCGTTATGACTGCTA CTGCTGCTCCAACAGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MSITAFLKKKISKIKKRFDVQKVPMMMQKDLETMAYLNKI
Sequences:
>Translated_40_residues MSITAFLKKKISKIKKRFDVQKVPMMMQKDLETMAYLNKI >Mature_39_residues SITAFLKKKISKIKKRFDVQKVPMMMQKDLETMAYLNKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4777; Mature: 4646
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 12.5 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 10.3 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITAFLKKKISKIKKRFDVQKVPMMMQKDLETMAYLNKI CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SITAFLKKKISKIKKRFDVQKVPMMMQKDLETMAYLNKI CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA