Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026006

Identifier: 124026006

GI number: 124026006

Start: 1099573

End: 1099905

Strand: Reverse

Name: 124026006

Synonym: NATL1_12991

Alternate gene names: NA

Gene position: 1099905-1099573 (Counterclockwise)

Preceding gene: 124026007

Following gene: 124026004

Centisome position: 58.98

GC content: 40.54

Gene sequence:

>333_bases
ATGGAAGACCAAATTATTGCTGCCGAAAAAAGCACATCTATTTCCGCCGAAATATGCCATTGGTCAGGAGCTGTATTTGG
TATTTTGTTTGGTTTAGGTTTCTTCTTGGCTGAAGTTCAAAAGAATGACTTAAAGTCTTTACCTTGGTGGAAGCCAATCT
CTGCCCTTGTGGCTGGAGCAGCAGTTTCTGCTCACGGTAATAATGTTGCTAATAATAAAAGGACAGCAGAATTAACTGCT
TTGTTGGTGAGATCAACAAATAGCGCGTCCGAGTTGCCGATAGCAAAGTCTTCAGAATATTCTGATCTTTTGGAGGACTC
TGATAATCAATGA

Upstream 100 bases:

>100_bases
ACGGCTGACTTGTATCGGATTAATTACTTATGTTCATAAGATTTAAAAGGTGCTTTTATATTGAATAAGTAATCACAATC
TTAGCTTTCGATTTTACCTG

Downstream 100 bases:

>100_bases
CTTACTAATCTATTCGGCGATAGAATTGTCAGTCAAATATTTTTATAAGGTTTCTTCTTTCTTAAATAGCGAGAAAAGAG
AAACCTAAAAACGTCAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MEDQIIAAEKSTSISAEICHWSGAVFGILFGLGFFLAEVQKNDLKSLPWWKPISALVAGAAVSAHGNNVANNKRTAELTA
LLVRSTNSASELPIAKSSEYSDLLEDSDNQ

Sequences:

>Translated_110_residues
MEDQIIAAEKSTSISAEICHWSGAVFGILFGLGFFLAEVQKNDLKSLPWWKPISALVAGAAVSAHGNNVANNKRTAELTA
LLVRSTNSASELPIAKSSEYSDLLEDSDNQ
>Mature_110_residues
MEDQIIAAEKSTSISAEICHWSGAVFGILFGLGFFLAEVQKNDLKSLPWWKPISALVAGAAVSAHGNNVANNKRTAELTA
LLVRSTNSASELPIAKSSEYSDLLEDSDNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11778; Mature: 11778

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDQIIAAEKSTSISAEICHWSGAVFGILFGLGFFLAEVQKNDLKSLPWWKPISALVAGA
CCCCEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AVSAHGNNVANNKRTAELTALLVRSTNSASELPIAKSSEYSDLLEDSDNQ
HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MEDQIIAAEKSTSISAEICHWSGAVFGILFGLGFFLAEVQKNDLKSLPWWKPISALVAGA
CCCCEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AVSAHGNNVANNKRTAELTALLVRSTNSASELPIAKSSEYSDLLEDSDNQ
HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA