| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025986
Identifier: 124025986
GI number: 124025986
Start: 1091462
End: 1092058
Strand: Direct
Name: 124025986
Synonym: NATL1_12791
Alternate gene names: NA
Gene position: 1091462-1092058 (Clockwise)
Preceding gene: 124025981
Following gene: 124025987
Centisome position: 58.53
GC content: 32.16
Gene sequence:
>597_bases TTGACCTTCAGATTATTATTATTATTAGCACATCTACAAGCTTTTCTCATCCCAATCATTATTGGAATTAAGTCCAGGAA CAAATTCAAGCAAATTAGATTTCCTCTGCTAACCCCTTTTGCCTTTATCTCACTAGGTCTTGCCTCAATGTTTGAGATGT TCGATCATACGACTACGGATTGGATATATGTAGATCACTCATCAATATACAATTGGCTGTTTTATTCATTTCTTTCTATT GGATTATCGTTCTTTACTATTTCAGTAGCTAAAAACAAGTCGATCATAACTAGTAATATTTTATTAATAATTGCCGCGGT TTTTTCTTATTGGTTTCTAGGCAAGTCAACAACTATTTTAATTCAAGTATTGATAAGTATTCAACTTATATCGCAATGGT GGAGCCGCTTTAAAGATTGGCTCTTCCTTATTTATCCAATCACGGGAGTAATCTTTACTACTTTTTTCGGAATTCTACTT TCAAGTTCAGGTGAACAAATATGGCATTTATTTATAGGTCCATCTGGAACGATAAGTGTTTTAACTTTTTACGCAGTTTT AAAGAGATCAAGAAAAAAAGAAATCATTTCTGCTTAA
Upstream 100 bases:
>100_bases ATTTTCAATCTCTAGTAAGTTTCTTTAAAAAACACTAGCTATCGTATTAGGAAGATTTCAATAAAGTTGCTAATTTCGTA TTAGCTCAAAATTAATTTAA
Downstream 100 bases:
>100_bases TAAGATATTGATCAATTTCTAGATCCCTGTGATTTATTTAAATTACATATGCAGTTATCTTCATAGATAAGATGATTCAA CCCCTAACGTAGTTTATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTFRLLLLLAHLQAFLIPIIIGIKSRNKFKQIRFPLLTPFAFISLGLASMFEMFDHTTTDWIYVDHSSIYNWLFYSFLSI GLSFFTISVAKNKSIITSNILLIIAAVFSYWFLGKSTTILIQVLISIQLISQWWSRFKDWLFLIYPITGVIFTTFFGILL SSSGEQIWHLFIGPSGTISVLTFYAVLKRSRKKEIISA
Sequences:
>Translated_198_residues MTFRLLLLLAHLQAFLIPIIIGIKSRNKFKQIRFPLLTPFAFISLGLASMFEMFDHTTTDWIYVDHSSIYNWLFYSFLSI GLSFFTISVAKNKSIITSNILLIIAAVFSYWFLGKSTTILIQVLISIQLISQWWSRFKDWLFLIYPITGVIFTTFFGILL SSSGEQIWHLFIGPSGTISVLTFYAVLKRSRKKEIISA >Mature_197_residues TFRLLLLLAHLQAFLIPIIIGIKSRNKFKQIRFPLLTPFAFISLGLASMFEMFDHTTTDWIYVDHSSIYNWLFYSFLSIG LSFFTISVAKNKSIITSNILLIIAAVFSYWFLGKSTTILIQVLISIQLISQWWSRFKDWLFLIYPITGVIFTTFFGILLS SSGEQIWHLFIGPSGTISVLTFYAVLKRSRKKEIISA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22826; Mature: 22695
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRLLLLLAHLQAFLIPIIIGIKSRNKFKQIRFPLLTPFAFISLGLASMFEMFDHTTTD CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC WIYVDHSSIYNWLFYSFLSIGLSFFTISVAKNKSIITSNILLIIAAVFSYWFLGKSTTIL EEEEEHHHHHHHHHHHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH IQVLISIQLISQWWSRFKDWLFLIYPITGVIFTTFFGILLSSSGEQIWHLFIGPSGTISV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH LTFYAVLKRSRKKEIISA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFRLLLLLAHLQAFLIPIIIGIKSRNKFKQIRFPLLTPFAFISLGLASMFEMFDHTTTD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC WIYVDHSSIYNWLFYSFLSIGLSFFTISVAKNKSIITSNILLIIAAVFSYWFLGKSTTIL EEEEEHHHHHHHHHHHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH IQVLISIQLISQWWSRFKDWLFLIYPITGVIFTTFFGILLSSSGEQIWHLFIGPSGTISV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH LTFYAVLKRSRKKEIISA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA