| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025959
Identifier: 124025959
GI number: 124025959
Start: 1080352
End: 1080765
Strand: Direct
Name: 124025959
Synonym: NATL1_12521
Alternate gene names: NA
Gene position: 1080352-1080765 (Clockwise)
Preceding gene: 124025958
Following gene: 124025960
Centisome position: 57.94
GC content: 33.57
Gene sequence:
>414_bases ATGATTAAACAAGTTATTACATGCATTCTCTCAATTCTATTTGTTGTTACACTTACACCCTATAAAGCAAATGCAACGAC AAATGATCTTCCAGAATGTGTTGTCATAACTCACTGTGTGAGAGAAGACTTTAAAGTAAATGATATAGAAAATGCTTTTA AAAAAGCCACCAAAATAGTTTCTGAAACAGCAAGAACAAAAATAGTTGAGAAGACTGATTCATATATTCATGCTGAAGCA AAGACAAAATGGAGAAGATATACCGATGATTTACTCCTCAAAGCAATTCCAGAGAAAGGTATTATTCAAGTCAGGTCAGA ATCAAGAGTTGGCGTTGGAGATAATGGAGTCAACAAGAAGAGAGTTGATGATTTTGCTTATCGTCTAATGACAGAAAGAG ACAACACTAACTAA
Upstream 100 bases:
>100_bases AATCCTCAAGATTATTAAAATCCAAAGTTAATTCACACTATTTTTTTTCGTAAGATATATTAACTAATATAGTTTAAGTT TTACGAGATTTTTTTAATTG
Downstream 100 bases:
>100_bases ACTATCAAAATCAACAACTCAAAGCACCTAGGTAAAGTCATTGATTTTGAACAAACTAAATTTTTCGATTAAGTTTGTTT GCGAAGGTATGGCTTAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MIKQVITCILSILFVVTLTPYKANATTNDLPECVVITHCVREDFKVNDIENAFKKATKIVSETARTKIVEKTDSYIHAEA KTKWRRYTDDLLLKAIPEKGIIQVRSESRVGVGDNGVNKKRVDDFAYRLMTERDNTN
Sequences:
>Translated_137_residues MIKQVITCILSILFVVTLTPYKANATTNDLPECVVITHCVREDFKVNDIENAFKKATKIVSETARTKIVEKTDSYIHAEA KTKWRRYTDDLLLKAIPEKGIIQVRSESRVGVGDNGVNKKRVDDFAYRLMTERDNTN >Mature_137_residues MIKQVITCILSILFVVTLTPYKANATTNDLPECVVITHCVREDFKVNDIENAFKKATKIVSETARTKIVEKTDSYIHAEA KTKWRRYTDDLLLKAIPEKGIIQVRSESRVGVGDNGVNKKRVDDFAYRLMTERDNTN
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15635; Mature: 15635
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQVITCILSILFVVTLTPYKANATTNDLPECVVITHCVREDFKVNDIENAFKKATKIV CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SETARTKIVEKTDSYIHAEAKTKWRRYTDDLLLKAIPEKGIIQVRSESRVGVGDNGVNKK HHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHH RVDDFAYRLMTERDNTN HHHHHHHHHHHCCCCCC >Mature Secondary Structure MIKQVITCILSILFVVTLTPYKANATTNDLPECVVITHCVREDFKVNDIENAFKKATKIV CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SETARTKIVEKTDSYIHAEAKTKWRRYTDDLLLKAIPEKGIIQVRSESRVGVGDNGVNKK HHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHH RVDDFAYRLMTERDNTN HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA