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The map label for this gene is crtI [H]

Identifier: 124025918

GI number: 124025918

Start: 1060594

End: 1062123

Strand: Direct

Name: crtI [H]

Synonym: NATL1_12111

Alternate gene names: 124025918

Gene position: 1060594-1062123 (Clockwise)

Preceding gene: 124025917

Following gene: 124025919

Centisome position: 56.88

GC content: 37.19

Gene sequence:

>1530_bases
ATGAGAAATCCTGAAGTAATAGTTATTGGAAGTGGTATAGGAGGTTTATGTTGCGGCGGACTACTCGCAAAAGCAGGTAA
AAAGGTCCTAATTCTTGAGGCTCACTCAAAGCCAGGAGGTGCTGCTCATGGCTTTGAGAAAAATGGTTATAAGTTTGAAT
CTGGTCCATCTCTATGGAGTGGAATAGGTAGTTGGCCTACTACAAATCCTTTAGGTCAGGTCCTTAAAGCTCTTAACCAA
AAAGTTGATTTAATTAAATATCAGGATTGGAATGTTCAAATTCCTGAGGGTGACTACACAATTGGAGTTGGAGATAGACG
TTTTCTTGATCAGATCAATTCAATTAGCGGAAAAGATGCCATTAAAGAGTGGGAAAATTTTATTCAAGTTATTAAACCTA
TTGGTGCAGCAGCTAATGCAATTCCTTTATTAGCTCTAAATCAAAACAAGGAAACCGTTTTTCAGCTGTTAAAACGTAGT
AAAACACTTATCACACACTTGAAATCTTTTAAATATCTTGGAGGTGATTTTGGAAATTTAGTTGATGACCATCTTAAAGA
TCCATTTTTAAGAAATTGGGTTGAATTACTTTGTTTTCTAATAAGTGGTTTATCTAAAGACGAAACAAATGCAGCAGCTA
TGGCAACACTTTTTGATGATTGGTTTAAACCCGATGCCTACTTGGAATATCCAAAGGGAGGAAGTGAATCAATCGTTAAG
GCACTATTGGAAGGGATTTACTCATTTGGAGGGGATCTTCAACTAAATTCAAAAGTTAGTCAGATAATAATAGAAAGGAA
TAAAGCAATCGGAATTGAATTGAAAAACGGTGAGAAAATATTTGCAGATCATATAGTTAGCAATGCAGATATTTGGAATA
CCGTTGAGTTAATACCAAAAGAGATATCCCAACAGTGGAGAGAGAAAAGGTCAAGGACTCCAAAATGTAAGTCATTTCTT
CATCTACATCTTGGGTTTAATGCAGAAGGACTAGATGATATTCCACTTCATTCAATATGGGTTAATGATTGGTCTAAGGG
TATTACAGCCGAGAGAAATGTTGTAGTTCTCTCTATTCCTTCGGCATTAGATCCAACAATGTCTCCACCAAATAAGCACA
TACTTCATGGGTATACACCTGCGAATGAACCGTGGGAAAGATGGGAGGGGCTTAAAATTGGTTCAAAAGAATATGAAAGT
ACAAAAGAAGAGAGGTGCTCAGTCTTCTGGGAACCAATAAAAAAATTAGTGCCTGATATAGAAGAAAGAATCGAAGTGAA
AATGCTAGGAACACCACTTACACATGAACGGTTTTTAAATACAAAAAATGGAAGTTATGGTCCAGCCTTATCAGCTGCAG
AAGGGCTTTTCCCAGGAAATAAAACTCCAATTAAAAATCTATTGTTGTGTGGCTCAAGTACATTCCCAGGGATCGGGATA
CCACCTGTAGCAGCCAGTGGTGCCATGGCCGCCAATACAATTCTTGGATCCAAATTTCAAAGAGATCTAATTGAAGAGCT
AGGCATATAA

Upstream 100 bases:

>100_bases
TTTAGTCAATATTTTTTTTAATATTCAATTGTTTGAAGCAGTCACAAAGAAATTGTTGTAGAAACTCTAAAGAAGAAAAA
ATCTCTTAATTAAAAAATAA

Downstream 100 bases:

>100_bases
AAAACGCCTATGGTTGCTAGACAACGTGAAAATACAAATCAAATGACCAACTCACTCAATAAAGCTTTTACAGGAGTAAT
TGCTCTTGCTCTGATTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRNPEVIVIGSGIGGLCCGGLLAKAGKKVLILEAHSKPGGAAHGFEKNGYKFESGPSLWSGIGSWPTTNPLGQVLKALNQ
KVDLIKYQDWNVQIPEGDYTIGVGDRRFLDQINSISGKDAIKEWENFIQVIKPIGAAANAIPLLALNQNKETVFQLLKRS
KTLITHLKSFKYLGGDFGNLVDDHLKDPFLRNWVELLCFLISGLSKDETNAAAMATLFDDWFKPDAYLEYPKGGSESIVK
ALLEGIYSFGGDLQLNSKVSQIIIERNKAIGIELKNGEKIFADHIVSNADIWNTVELIPKEISQQWREKRSRTPKCKSFL
HLHLGFNAEGLDDIPLHSIWVNDWSKGITAERNVVVLSIPSALDPTMSPPNKHILHGYTPANEPWERWEGLKIGSKEYES
TKEERCSVFWEPIKKLVPDIEERIEVKMLGTPLTHERFLNTKNGSYGPALSAAEGLFPGNKTPIKNLLLCGSSTFPGIGI
PPVAASGAMAANTILGSKFQRDLIEELGI

Sequences:

>Translated_509_residues
MRNPEVIVIGSGIGGLCCGGLLAKAGKKVLILEAHSKPGGAAHGFEKNGYKFESGPSLWSGIGSWPTTNPLGQVLKALNQ
KVDLIKYQDWNVQIPEGDYTIGVGDRRFLDQINSISGKDAIKEWENFIQVIKPIGAAANAIPLLALNQNKETVFQLLKRS
KTLITHLKSFKYLGGDFGNLVDDHLKDPFLRNWVELLCFLISGLSKDETNAAAMATLFDDWFKPDAYLEYPKGGSESIVK
ALLEGIYSFGGDLQLNSKVSQIIIERNKAIGIELKNGEKIFADHIVSNADIWNTVELIPKEISQQWREKRSRTPKCKSFL
HLHLGFNAEGLDDIPLHSIWVNDWSKGITAERNVVVLSIPSALDPTMSPPNKHILHGYTPANEPWERWEGLKIGSKEYES
TKEERCSVFWEPIKKLVPDIEERIEVKMLGTPLTHERFLNTKNGSYGPALSAAEGLFPGNKTPIKNLLLCGSSTFPGIGI
PPVAASGAMAANTILGSKFQRDLIEELGI
>Mature_509_residues
MRNPEVIVIGSGIGGLCCGGLLAKAGKKVLILEAHSKPGGAAHGFEKNGYKFESGPSLWSGIGSWPTTNPLGQVLKALNQ
KVDLIKYQDWNVQIPEGDYTIGVGDRRFLDQINSISGKDAIKEWENFIQVIKPIGAAANAIPLLALNQNKETVFQLLKRS
KTLITHLKSFKYLGGDFGNLVDDHLKDPFLRNWVELLCFLISGLSKDETNAAAMATLFDDWFKPDAYLEYPKGGSESIVK
ALLEGIYSFGGDLQLNSKVSQIIIERNKAIGIELKNGEKIFADHIVSNADIWNTVELIPKEISQQWREKRSRTPKCKSFL
HLHLGFNAEGLDDIPLHSIWVNDWSKGITAERNVVVLSIPSALDPTMSPPNKHILHGYTPANEPWERWEGLKIGSKEYES
TKEERCSVFWEPIKKLVPDIEERIEVKMLGTPLTHERFLNTKNGSYGPALSAAEGLFPGNKTPIKNLLLCGSSTFPGIGI
PPVAASGAMAANTILGSKFQRDLIEELGI

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI203098013, Length=542, Percent_Identity=25.2767527675277, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56133; Mature: 56133

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPEVIVIGSGIGGLCCGGLLAKAGKKVLILEAHSKPGGAAHGFEKNGYKFESGPSLWS
CCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCHHHH
GIGSWPTTNPLGQVLKALNQKVDLIKYQDWNVQIPEGDYTIGVGDRRFLDQINSISGKDA
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCEEECCCCCEEECCCCHHHHHHHHCCCCHHH
IKEWENFIQVIKPIGAAANAIPLLALNQNKETVFQLLKRSKTLITHLKSFKYLGGDFGNL
HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VDDHLKDPFLRNWVELLCFLISGLSKDETNAAAMATLFDDWFKPDAYLEYPKGGSESIVK
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHH
ALLEGIYSFGGDLQLNSKVSQIIIERNKAIGIELKNGEKIFADHIVSNADIWNTVELIPK
HHHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCCCEEHHHHHHCCCCHHHHHHHHHH
EISQQWREKRSRTPKCKSFLHLHLGFNAEGLDDIPLHSIWVNDWSKGITAERNVVVLSIP
HHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCEEEECCHHCCCCCCCCEEEEECC
SALDPTMSPPNKHILHGYTPANEPWERWEGLKIGSKEYESTKEERCSVFWEPIKKLVPDI
CCCCCCCCCCCCCEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EERIEVKMLGTPLTHERFLNTKNGSYGPALSAAEGLFPGNKTPIKNLLLCGSSTFPGIGI
HHHEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHEEECCCCCCCCCC
PPVAASGAMAANTILGSKFQRDLIEELGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNPEVIVIGSGIGGLCCGGLLAKAGKKVLILEAHSKPGGAAHGFEKNGYKFESGPSLWS
CCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCHHHH
GIGSWPTTNPLGQVLKALNQKVDLIKYQDWNVQIPEGDYTIGVGDRRFLDQINSISGKDA
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCEEECCCCCEEECCCCHHHHHHHHCCCCHHH
IKEWENFIQVIKPIGAAANAIPLLALNQNKETVFQLLKRSKTLITHLKSFKYLGGDFGNL
HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VDDHLKDPFLRNWVELLCFLISGLSKDETNAAAMATLFDDWFKPDAYLEYPKGGSESIVK
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHH
ALLEGIYSFGGDLQLNSKVSQIIIERNKAIGIELKNGEKIFADHIVSNADIWNTVELIPK
HHHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCCCEEHHHHHHCCCCHHHHHHHHHH
EISQQWREKRSRTPKCKSFLHLHLGFNAEGLDDIPLHSIWVNDWSKGITAERNVVVLSIP
HHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCEEEECCHHCCCCCCCCEEEEECC
SALDPTMSPPNKHILHGYTPANEPWERWEGLKIGSKEYESTKEERCSVFWEPIKKLVPDI
CCCCCCCCCCCCCEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EERIEVKMLGTPLTHERFLNTKNGSYGPALSAAEGLFPGNKTPIKNLLLCGSSTFPGIGI
HHHEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHEEECCCCCCCCCC
PPVAASGAMAANTILGSKFQRDLIEELGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]