Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025878

Identifier: 124025878

GI number: 124025878

Start: 1041160

End: 1041354

Strand: Direct

Name: 124025878

Synonym: NATL1_11711

Alternate gene names: NA

Gene position: 1041160-1041354 (Clockwise)

Preceding gene: 124025877

Following gene: 124025879

Centisome position: 55.83

GC content: 37.95

Gene sequence:

>195_bases
ATGAATCAGACTCCAGAGAAAGAGAAGGGAATGAGCTTTATTAAAAAAGCTGGTAAATGGGCTCCATTAGTTGGAGGAGC
ATGGATTGTTCTGAATATTGTTGTTCCATTAGCTCTTCTTCGTATTCCTGCAGTCCAAAAATACTTAGTAGTACTTGAAG
ACAAACTCCCTTTTGATATTCCAGGTATTGGTTAG

Upstream 100 bases:

>100_bases
CTCAACGCAATCAGCCTTAATGCCCATTGCATTTCCACTACACATGATCAAAAATAGAAAGTTTGGGGTCTAGCTAAGAT
CTAATCAATAAATCAAAAAC

Downstream 100 bases:

>100_bases
ATGGCAACAGAGATTATTTGTTTTTTCTTGCTTGGTATTGCAGCACTGCTTCTAAATGCTGGACTCGACGCTCAAGTTCT
TCCACTCTTTTGGCTAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MNQTPEKEKGMSFIKKAGKWAPLVGGAWIVLNIVVPLALLRIPAVQKYLVVLEDKLPFDIPGIG

Sequences:

>Translated_64_residues
MNQTPEKEKGMSFIKKAGKWAPLVGGAWIVLNIVVPLALLRIPAVQKYLVVLEDKLPFDIPGIG
>Mature_64_residues
MNQTPEKEKGMSFIKKAGKWAPLVGGAWIVLNIVVPLALLRIPAVQKYLVVLEDKLPFDIPGIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7013; Mature: 7013

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTPEKEKGMSFIKKAGKWAPLVGGAWIVLNIVVPLALLRIPAVQKYLVVLEDKLPFDI
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGIG
CCCC
>Mature Secondary Structure
MNQTPEKEKGMSFIKKAGKWAPLVGGAWIVLNIVVPLALLRIPAVQKYLVVLEDKLPFDI
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGIG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA