Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025871

Identifier: 124025871

GI number: 124025871

Start: 1038435

End: 1038569

Strand: Direct

Name: 124025871

Synonym: NATL1_11641

Alternate gene names: NA

Gene position: 1038435-1038569 (Clockwise)

Preceding gene: 124025870

Following gene: 124025872

Centisome position: 55.69

GC content: 31.85

Gene sequence:

>135_bases
ATGAAACCACTTGCAGACAGTAATCATCTTCAACAAGTATTAGCTCAGATTCAATTAAACATAATCAGAACTAAAGATCA
AAAGATGTCTGATCATCTCTGGTATCAGAAATCAATGTGTGATGGAGAAAAATAA

Upstream 100 bases:

>100_bases
GTAGCCTTACTACTTGCAATAGCTAAAAGTGGATAGGTGATTTCGACTACACGAAAAAATCTGAAAAAATGCTAGAAAAT
AACATAATTAAATTCTTATA

Downstream 100 bases:

>100_bases
AAAATTAATGAAGAAATTAAAAACAATATTCCCTTTTATCGCTGCTATTGGAGTTTTCTTTTTGGCTAGTAATTCACCTA
TGTGGAAACAAATGGTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MKPLADSNHLQQVLAQIQLNIIRTKDQKMSDHLWYQKSMCDGEK

Sequences:

>Translated_44_residues
MKPLADSNHLQQVLAQIQLNIIRTKDQKMSDHLWYQKSMCDGEK
>Mature_44_residues
MKPLADSNHLQQVLAQIQLNIIRTKDQKMSDHLWYQKSMCDGEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5185; Mature: 5185

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLADSNHLQQVLAQIQLNIIRTKDQKMSDHLWYQKSMCDGEK
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKPLADSNHLQQVLAQIQLNIIRTKDQKMSDHLWYQKSMCDGEK
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA