| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025810
Identifier: 124025810
GI number: 124025810
Start: 1005102
End: 1005503
Strand: Direct
Name: 124025810
Synonym: NATL1_11031
Alternate gene names: NA
Gene position: 1005102-1005503 (Clockwise)
Preceding gene: 124025806
Following gene: 124025811
Centisome position: 53.9
GC content: 34.33
Gene sequence:
>402_bases ATGTCAGATAAAAGTTTATTTATATATGATGGTGAATGTCCATTTTGCAATCACTTTGCACAATTAATTGAATTAAAAAG CAGTCTCCCTCAATTCGAAATAATAGATGGAAGAAAAAATCTAGCCCTATTAACTCAACTCTATAACAAAGGATATGATC TGAATAAAGGAGCAATTCTAATCAGCGATGAAAATATCATGCATGGTGCTGATGCGATTCATTGGATTTGCTCTGAGATC AAGGAGCCAAGCGATTCATTGTTAGAAGTACTCAGGATTATTTTCACCTCTAACAGGAGGACTAATTTTTTATTCCCATT CCTTTTATGGGGAAGAAGATTATCACTGACATTAAAAGGGAAGGTATGGCATCCAGTCAGCGGAAATAATCAATTTTTCT GA
Upstream 100 bases:
>100_bases ATTTTTACTTTTATTTTCTGAGGCTTCATTTAAAAATATTTCCCTTTTTGACCCGTTTTCAGACTAAGTGTATGTACAAT GTATTAACCAATAAATAATC
Downstream 100 bases:
>100_bases AGTAGTCACGCAAACTGAATTCATAATTCGAAGTTGAGCAAATATTAAAACTTTAATAGTTTGAGAATAATAACCAATAG GACGAATTAGAAGTAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSDKSLFIYDGECPFCNHFAQLIELKSSLPQFEIIDGRKNLALLTQLYNKGYDLNKGAILISDENIMHGADAIHWICSEI KEPSDSLLEVLRIIFTSNRRTNFLFPFLLWGRRLSLTLKGKVWHPVSGNNQFF
Sequences:
>Translated_133_residues MSDKSLFIYDGECPFCNHFAQLIELKSSLPQFEIIDGRKNLALLTQLYNKGYDLNKGAILISDENIMHGADAIHWICSEI KEPSDSLLEVLRIIFTSNRRTNFLFPFLLWGRRLSLTLKGKVWHPVSGNNQFF >Mature_132_residues SDKSLFIYDGECPFCNHFAQLIELKSSLPQFEIIDGRKNLALLTQLYNKGYDLNKGAILISDENIMHGADAIHWICSEIK EPSDSLLEVLRIIFTSNRRTNFLFPFLLWGRRLSLTLKGKVWHPVSGNNQFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15335; Mature: 15204
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKSLFIYDGECPFCNHFAQLIELKSSLPQFEIIDGRKNLALLTQLYNKGYDLNKGAIL CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEE ISDENIMHGADAIHWICSEIKEPSDSLLEVLRIIFTSNRRTNFLFPFLLWGRRLSLTLKG EECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHCCCEEEEEECC KVWHPVSGNNQFF EEECCCCCCCCCC >Mature Secondary Structure SDKSLFIYDGECPFCNHFAQLIELKSSLPQFEIIDGRKNLALLTQLYNKGYDLNKGAIL CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEE ISDENIMHGADAIHWICSEIKEPSDSLLEVLRIIFTSNRRTNFLFPFLLWGRRLSLTLKG EECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHCCCEEEEEECC KVWHPVSGNNQFF EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA