| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025793
Identifier: 124025793
GI number: 124025793
Start: 996297
End: 997037
Strand: Direct
Name: 124025793
Synonym: NATL1_10861
Alternate gene names: NA
Gene position: 996297-997037 (Clockwise)
Preceding gene: 124025787
Following gene: 124025797
Centisome position: 53.43
GC content: 32.39
Gene sequence:
>741_bases ATGACGATAAAAGCAACTTACTACGGAGCGAATGGGTGGCTTATTGAATTGGATAAAACAAGAATTTTGATTGACCCTTG GTTAAATGGCGATTTAACTTTCCCTCCAGGAGATTGGCTAATAAAGGGGGAACTGGCTAAAGAAGTTGAGATTCCTAGAA GCATTGATTTTTTATTACTAACTCAAGGCCAGCCTGATCATGCCCATCCGCCAACACTAGAGAAAATAAATAAAAGTATT CCAGTAATAGCTTCACAAGCAGCTAGTAATGTTGTAAGTAAAATTGGTTTTACAGAAATAAAAACACTAAGACCAGGTGA AGCTTTTAAAAAGAACAATATAAATATTCAAGCTACATCAGGTGCATCAGTTCCAAATATTGAAAATGGATACATTATTG AATCAGGACAAGATTCAATTTATATCGAGCCACATGGTTTTCTTGACAAACAAATTAAAGCTAGAAATATAGATTTATTA ATAACACCAGTAATAGATTTTTCATTACCACTCGCAGGTAAATTTATTAGAGGTAAAACAGTACTACCTCAATTATTAAA GTTATTTAATCCAACAACAGTATTAGCAAGCACAACAGGGGGAGATATTACTTTTACAGGCTTAATAAATAATCTAATCA AAGTTGATGGTTCAGTTGAAGATAAAACCTTGTTGAAAGATAGTAGTGCTAGTTTAATAAGTCCTGAACCATTAAAAGAA TATAAATTCGAGAAAAACTAA
Upstream 100 bases:
>100_bases ATTATTAATAATATCAGTGATATATTGATATCGTAAAACAAAGGAAATTAATAAACTAATCCACCATATAAAAAATCTTC AGTTATATTGAAAGAAAAAA
Downstream 100 bases:
>100_bases ACAAAGAGAAGTCCTCTATAAATTATTTTTCTCGACTTGAGTAATATAAAATTGAGAAACTTCATTTAGCATTTTTATGA CGACTTCGTTACTACACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTIKATYYGANGWLIELDKTRILIDPWLNGDLTFPPGDWLIKGELAKEVEIPRSIDFLLLTQGQPDHAHPPTLEKINKSI PVIASQAASNVVSKIGFTEIKTLRPGEAFKKNNINIQATSGASVPNIENGYIIESGQDSIYIEPHGFLDKQIKARNIDLL ITPVIDFSLPLAGKFIRGKTVLPQLLKLFNPTTVLASTTGGDITFTGLINNLIKVDGSVEDKTLLKDSSASLISPEPLKE YKFEKN
Sequences:
>Translated_246_residues MTIKATYYGANGWLIELDKTRILIDPWLNGDLTFPPGDWLIKGELAKEVEIPRSIDFLLLTQGQPDHAHPPTLEKINKSI PVIASQAASNVVSKIGFTEIKTLRPGEAFKKNNINIQATSGASVPNIENGYIIESGQDSIYIEPHGFLDKQIKARNIDLL ITPVIDFSLPLAGKFIRGKTVLPQLLKLFNPTTVLASTTGGDITFTGLINNLIKVDGSVEDKTLLKDSSASLISPEPLKE YKFEKN >Mature_245_residues TIKATYYGANGWLIELDKTRILIDPWLNGDLTFPPGDWLIKGELAKEVEIPRSIDFLLLTQGQPDHAHPPTLEKINKSIP VIASQAASNVVSKIGFTEIKTLRPGEAFKKNNINIQATSGASVPNIENGYIIESGQDSIYIEPHGFLDKQIKARNIDLLI TPVIDFSLPLAGKFIRGKTVLPQLLKLFNPTTVLASTTGGDITFTGLINNLIKVDGSVEDKTLLKDSSASLISPEPLKEY KFEKN
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27007; Mature: 26876
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKATYYGANGWLIELDKTRILIDPWLNGDLTFPPGDWLIKGELAKEVEIPRSIDFLLL CEEEEEEECCCCEEEEECCCEEEEECCCCCCEECCCCCEEEECCCHHHCCCCCCCEEEEE TQGQPDHAHPPTLEKINKSIPVIASQAASNVVSKIGFTEIKTLRPGEAFKKNNINIQATS ECCCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHEEECCCCCCHHCCCCEEEECC GASVPNIENGYIIESGQDSIYIEPHGFLDKQIKARNIDLLITPVIDFSLPLAGKFIRGKT CCCCCCCCCCEEEECCCCEEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCEEECCCH VLPQLLKLFNPTTVLASTTGGDITFTGLINNLIKVDGSVEDKTLLKDSSASLISPEPLKE HHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHH YKFEKN CCCCCC >Mature Secondary Structure TIKATYYGANGWLIELDKTRILIDPWLNGDLTFPPGDWLIKGELAKEVEIPRSIDFLLL EEEEEEECCCCEEEEECCCEEEEECCCCCCEECCCCCEEEECCCHHHCCCCCCCEEEEE TQGQPDHAHPPTLEKINKSIPVIASQAASNVVSKIGFTEIKTLRPGEAFKKNNINIQATS ECCCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHEEECCCCCCHHCCCCEEEECC GASVPNIENGYIIESGQDSIYIEPHGFLDKQIKARNIDLLITPVIDFSLPLAGKFIRGKT CCCCCCCCCCEEEECCCCEEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCEEECCCH VLPQLLKLFNPTTVLASTTGGDITFTGLINNLIKVDGSVEDKTLLKDSSASLISPEPLKE HHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHH YKFEKN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA