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The map label for this gene is csgA [H]

Identifier: 124025792

GI number: 124025792

Start: 995270

End: 995989

Strand: Reverse

Name: csgA [H]

Synonym: NATL1_10851

Alternate gene names: 124025792

Gene position: 995989-995270 (Counterclockwise)

Preceding gene: 124025794

Following gene: 124025791

Centisome position: 53.41

GC content: 34.03

Gene sequence:

>720_bases
ATGACAATTCGAGATTGGGATGGAGTAGCTCTAATTATTGGTGCAGGCGGTATTGGTAAATGTATGTCAGATTATTTGAC
AACTATATCACCAAAGTTGGATGTTTTTTTATGTGGGCGAACTCTAAAAAGTCAAAATGCCATATATTTAGATTTAGAAA
ATGATCATTCATTTATATCTTTTGAAAACCAAATCTCACTATTTAACAAACCCCTTCGTCTAGTCATAAATACCAGCGGT
TTTCTTCACTCAACTCATTTAAAACCTGAAAAGAGACTTTCTCATATCAGTCGCTCTAATATTATCAAGAATTTTTCTAT
TAATTCAATTGCCCCAATTTTGATTGCTAAAAGTATAGAAAAATTTATCAGACCAGAATTACCATTCTCCTATGCAAGTT
TGAGTGCCAGGGTTGGAAGTATTGGCGATAATAGGCTTGGTGGGTGGTATTCATATAGGGCTTCTAAAGCTGCTCAGAAT
CAGTTTTTAAAAACTCTCAGTATTGAATGGCGTCGAAAATTCCCTTTATCAATTGTATCTATATTGCATCCAGGGACTTG
TGATACGAAATTATCAAAACCTTTTCAATCTGCTGTTCCTAAAGGTAAACTTTTTACTCCTGCTCAATCAACAGAATACT
TAATTAATATTATTTCTTCGCAAAAGCCTGCTGACTCAGGTAATTTTTTAGCTTGGGATAGCAGTGTTATTCCATGGTAA

Upstream 100 bases:

>100_bases
TTAATTATTATATTAGATGATTTATGTAGATAAATTTAGTTTATTTGAACTCTCGGTGGTGAAAAGATTTCTCTAGTATT
GAGTTTAACCTCTTAATATC

Downstream 100 bases:

>100_bases
GTTTAGATTTCAATAATTAAAATCTTTCTATTTAAACATTTAGATATTTTTTCTGTTATGTATTTATTCGGTGTAATATA
ACAAAAGTAATATATTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: C signal [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTIRDWDGVALIIGAGGIGKCMSDYLTTISPKLDVFLCGRTLKSQNAIYLDLENDHSFISFENQISLFNKPLRLVINTSG
FLHSTHLKPEKRLSHISRSNIIKNFSINSIAPILIAKSIEKFIRPELPFSYASLSARVGSIGDNRLGGWYSYRASKAAQN
QFLKTLSIEWRRKFPLSIVSILHPGTCDTKLSKPFQSAVPKGKLFTPAQSTEYLINIISSQKPADSGNFLAWDSSVIPW

Sequences:

>Translated_239_residues
MTIRDWDGVALIIGAGGIGKCMSDYLTTISPKLDVFLCGRTLKSQNAIYLDLENDHSFISFENQISLFNKPLRLVINTSG
FLHSTHLKPEKRLSHISRSNIIKNFSINSIAPILIAKSIEKFIRPELPFSYASLSARVGSIGDNRLGGWYSYRASKAAQN
QFLKTLSIEWRRKFPLSIVSILHPGTCDTKLSKPFQSAVPKGKLFTPAQSTEYLINIISSQKPADSGNFLAWDSSVIPW
>Mature_238_residues
TIRDWDGVALIIGAGGIGKCMSDYLTTISPKLDVFLCGRTLKSQNAIYLDLENDHSFISFENQISLFNKPLRLVINTSGF
LHSTHLKPEKRLSHISRSNIIKNFSINSIAPILIAKSIEKFIRPELPFSYASLSARVGSIGDNRLGGWYSYRASKAAQNQ
FLKTLSIEWRRKFPLSIVSILHPGTCDTKLSKPFQSAVPKGKLFTPAQSTEYLINIISSQKPADSGNFLAWDSSVIPW

Specific function: Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation [H]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast YKL071W [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 26650; Mature: 26519

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRDWDGVALIIGAGGIGKCMSDYLTTISPKLDVFLCGRTLKSQNAIYLDLENDHSFIS
CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCEEE
FENQISLFNKPLRLVINTSGFLHSTHLKPEKRLSHISRSNIIKNFSINSIAPILIAKSIE
ECCHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KFIRPELPFSYASLSARVGSIGDNRLGGWYSYRASKAAQNQFLKTLSIEWRRKFPLSIVS
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ILHPGTCDTKLSKPFQSAVPKGKLFTPAQSTEYLINIISSQKPADSGNFLAWDSSVIPW
HHCCCCCCCHHCCCHHHHCCCCCEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
TIRDWDGVALIIGAGGIGKCMSDYLTTISPKLDVFLCGRTLKSQNAIYLDLENDHSFIS
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCEEE
FENQISLFNKPLRLVINTSGFLHSTHLKPEKRLSHISRSNIIKNFSINSIAPILIAKSIE
ECCHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KFIRPELPFSYASLSARVGSIGDNRLGGWYSYRASKAAQNQFLKTLSIEWRRKFPLSIVS
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ILHPGTCDTKLSKPFQSAVPKGKLFTPAQSTEYLINIISSQKPADSGNFLAWDSSVIPW
HHCCCCCCCHHCCCHHHHCCCCCEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152896; 2107980; 2118510; 1372277 [H]