Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025763

Identifier: 124025763

GI number: 124025763

Start: 974371

End: 975033

Strand: Reverse

Name: 124025763

Synonym: NATL1_10561

Alternate gene names: NA

Gene position: 975033-974371 (Counterclockwise)

Preceding gene: 124025765

Following gene: 124025762

Centisome position: 52.29

GC content: 33.18

Gene sequence:

>663_bases
GTGTGCGATTTTATAAAACCAACATTAAAGCTAGCAAATCAGCAAACTCCTGTCATTATTGACTCTATGAAGACTTCTAA
TTTAGTTGCCACGCATAGTAAAGAATTCATTAATGAATCCAAAAATTTTAAAACCTGTGGTGTAAGTGGTTATTTAAATT
GCTTTATTGCTAAGGATGCCTCTAGAAAACTTGATTTTTTAATTTTAGTTATCGAAACGCTTCAAATCAATGCAACGGAT
TCCCTCTTTTTGAAGGCTAAAAATATTGGTTTGTCATATGAGTTCACTAGTAGAGTTCAATTCTGGAAAATCAGATGTAC
TAACCCGTTGAGGAAAAGTCACACCTTTTCTTCACTCTCACCAGAGCAGATAGATTCACTTGTTGAACTTATTTCTTCCA
TGGCAGAAAACCTTTATCCTCTTATTAGGCAATTACTTTCCTCAAAAGAATCTAAGACACTGAATCAAGAGCGATGGTTT
TTATTTAGTTCACGTCTAAAGTCACTTATATCTGAGAGGATGAATTTGAAGCGTAGTTATATAACCTCCTTATTAAATGA
TGATAAGTATGAATTTTTTAGAGAGTTATTAGTCATTCTTTCTTTGTCATGTGGAAAAGGTGGAGCTTGCCGACTAAAAG
CTTCTTTATATCATCAATCTTAG

Upstream 100 bases:

>100_bases
ATATTGGGTTTAAGTCTTTGAAGACGATTCCCTTTTTCGGGTAATCATTTATTTCTGTAATGTATTTCTTTAAGTGATCC
ATGCACTATAAATATTTGAG

Downstream 100 bases:

>100_bases
TTTATATAAATGATTAACTTATCTTATAGATTTGATCAAAACTCTTCATCTCTAGAACTTGATGGTATGCCAGATGTTTC
AAATGGAGACTCAGAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MCDFIKPTLKLANQQTPVIIDSMKTSNLVATHSKEFINESKNFKTCGVSGYLNCFIAKDASRKLDFLILVIETLQINATD
SLFLKAKNIGLSYEFTSRVQFWKIRCTNPLRKSHTFSSLSPEQIDSLVELISSMAENLYPLIRQLLSSKESKTLNQERWF
LFSSRLKSLISERMNLKRSYITSLLNDDKYEFFRELLVILSLSCGKGGACRLKASLYHQS

Sequences:

>Translated_220_residues
MCDFIKPTLKLANQQTPVIIDSMKTSNLVATHSKEFINESKNFKTCGVSGYLNCFIAKDASRKLDFLILVIETLQINATD
SLFLKAKNIGLSYEFTSRVQFWKIRCTNPLRKSHTFSSLSPEQIDSLVELISSMAENLYPLIRQLLSSKESKTLNQERWF
LFSSRLKSLISERMNLKRSYITSLLNDDKYEFFRELLVILSLSCGKGGACRLKASLYHQS
>Mature_220_residues
MCDFIKPTLKLANQQTPVIIDSMKTSNLVATHSKEFINESKNFKTCGVSGYLNCFIAKDASRKLDFLILVIETLQINATD
SLFLKAKNIGLSYEFTSRVQFWKIRCTNPLRKSHTFSSLSPEQIDSLVELISSMAENLYPLIRQLLSSKESKTLNQERWF
LFSSRLKSLISERMNLKRSYITSLLNDDKYEFFRELLVILSLSCGKGGACRLKASLYHQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25188; Mature: 25188

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDFIKPTLKLANQQTPVIIDSMKTSNLVATHSKEFINESKNFKTCGVSGYLNCFIAKDA
CCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCC
SRKLDFLILVIETLQINATDSLFLKAKNIGLSYEFTSRVQFWKIRCTNPLRKSHTFSSLS
CCHHHHHEEEEEHHCCCCCCCEEEEEECCCCEEEECCCEEEEEEEECCCHHHCCCCCCCC
PEQIDSLVELISSMAENLYPLIRQLLSSKESKTLNQERWFLFSSRLKSLISERMNLKRSY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITSLLNDDKYEFFRELLVILSLSCGKGGACRLKASLYHQS
HHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEHCCCCCC
>Mature Secondary Structure
MCDFIKPTLKLANQQTPVIIDSMKTSNLVATHSKEFINESKNFKTCGVSGYLNCFIAKDA
CCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCC
SRKLDFLILVIETLQINATDSLFLKAKNIGLSYEFTSRVQFWKIRCTNPLRKSHTFSSLS
CCHHHHHEEEEEHHCCCCCCCEEEEEECCCCEEEECCCEEEEEEEECCCHHHCCCCCCCC
PEQIDSLVELISSMAENLYPLIRQLLSSKESKTLNQERWFLFSSRLKSLISERMNLKRSY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITSLLNDDKYEFFRELLVILSLSCGKGGACRLKASLYHQS
HHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA