Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025762

Identifier: 124025762

GI number: 124025762

Start: 973762

End: 974361

Strand: Reverse

Name: 124025762

Synonym: NATL1_10551

Alternate gene names: NA

Gene position: 974361-973762 (Counterclockwise)

Preceding gene: 124025763

Following gene: 124025761

Centisome position: 52.25

GC content: 30.5

Gene sequence:

>600_bases
ATGATTAACTTATCTTATAGATTTGATCAAAACTCTTCATCTCTAGAACTTGATGGTATGCCAGATGTTTCAAATGGAGA
CTCAGAGAATACTATTGGTATCTTATCTTCATGGACATTGAAAATAATTGGCTCACCTACATTAGAGGGTGAAAAGGATC
ATCTTGAATACTTGATGCAAGTAATTCTTCAATATTCACGATCGTATATCTCTGGAATTCGAAAAACATTTATATCAAAA
AAAGGTATTGTAACGATCTCTCCATTCGGCAGTAGTCATAAATTACTTCTTAATAGTACAAAGAAAGATGTTAAGCCTCT
CGAAATTATATTAGATGATTCGGAATTGTCAGATCTTACTCAATGCTTTGATTTATTGAGGTATGATTCCAGATTTAACC
TTAAATGGAATATCACTTTAGATAGACCTTATACCAAGAGATATATTCAGTCTAGCGCTTTTAAATCAAAGAAAAGATTT
ACATTATTTTATGCATTCATTATATTTTTATCTACCAGCTCCCTTATGTTGTTGATCCCTACCAATAGTAAATTTGATTT
GAGTGAACCTACTAAATCTTCTCAAACTATAAATGAATAA

Upstream 100 bases:

>100_bases
ATTTTTTAGAGAGTTATTAGTCATTCTTTCTTTGTCATGTGGAAAAGGTGGAGCTTGCCGACTAAAAGCTTCTTTATATC
ATCAATCTTAGTTTATATAA

Downstream 100 bases:

>100_bases
GGTTCATATTAACTAAACAATATTATATGAATTTCCTTTAGATTGATATATTGTATATTACTTTATTTATAATTCGCTAA
TACATAAAAACTCTACTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MINLSYRFDQNSSSLELDGMPDVSNGDSENTIGILSSWTLKIIGSPTLEGEKDHLEYLMQVILQYSRSYISGIRKTFISK
KGIVTISPFGSSHKLLLNSTKKDVKPLEIILDDSELSDLTQCFDLLRYDSRFNLKWNITLDRPYTKRYIQSSAFKSKKRF
TLFYAFIIFLSTSSLMLLIPTNSKFDLSEPTKSSQTINE

Sequences:

>Translated_199_residues
MINLSYRFDQNSSSLELDGMPDVSNGDSENTIGILSSWTLKIIGSPTLEGEKDHLEYLMQVILQYSRSYISGIRKTFISK
KGIVTISPFGSSHKLLLNSTKKDVKPLEIILDDSELSDLTQCFDLLRYDSRFNLKWNITLDRPYTKRYIQSSAFKSKKRF
TLFYAFIIFLSTSSLMLLIPTNSKFDLSEPTKSSQTINE
>Mature_199_residues
MINLSYRFDQNSSSLELDGMPDVSNGDSENTIGILSSWTLKIIGSPTLEGEKDHLEYLMQVILQYSRSYISGIRKTFISK
KGIVTISPFGSSHKLLLNSTKKDVKPLEIILDDSELSDLTQCFDLLRYDSRFNLKWNITLDRPYTKRYIQSSAFKSKKRF
TLFYAFIIFLSTSSLMLLIPTNSKFDLSEPTKSSQTINE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22766; Mature: 22766

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLSYRFDQNSSSLELDGMPDVSNGDSENTIGILSSWTLKIIGSPTLEGEKDHLEYLMQ
CCEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCCHHHHHHHHH
VILQYSRSYISGIRKTFISKKGIVTISPFGSSHKLLLNSTKKDVKPLEIILDDSELSDLT
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCHHHHH
QCFDLLRYDSRFNLKWNITLDRPYTKRYIQSSAFKSKKRFTLFYAFIIFLSTSSLMLLIP
HHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEE
TNSKFDLSEPTKSSQTINE
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINLSYRFDQNSSSLELDGMPDVSNGDSENTIGILSSWTLKIIGSPTLEGEKDHLEYLMQ
CCEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCCHHHHHHHHH
VILQYSRSYISGIRKTFISKKGIVTISPFGSSHKLLLNSTKKDVKPLEIILDDSELSDLT
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCHHHHH
QCFDLLRYDSRFNLKWNITLDRPYTKRYIQSSAFKSKKRFTLFYAFIIFLSTSSLMLLIP
HHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEE
TNSKFDLSEPTKSSQTINE
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA