| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is cbbYC [H]
Identifier: 124025744
GI number: 124025744
Start: 955387
End: 956133
Strand: Reverse
Name: cbbYC [H]
Synonym: NATL1_10371
Alternate gene names: 124025744
Gene position: 956133-955387 (Counterclockwise)
Preceding gene: 124025746
Following gene: 124025743
Centisome position: 51.27
GC content: 33.6
Gene sequence:
>747_bases ATGCATAAATTAAAAGCAGTCTTTTGGGATGTGGATGGAACAATTGCCGATACAGAATTGTGTGGGCATAGAGTCGCTTT TAATTTGGCCTTTAAGGATTTTGATTTGGATTGGAACTGGAATGAGAGCCAATATTTGGATCTTCTAAAAATATCGGGAG GTTTTAACCGCATAATCCACTATCGAAACAAAATCGATAGTGACATTACTGAAAGCAAATGTTCCGAGATTCAAGCCAGG AAGCGTATTCATTACAAGAAATTAATTCAATCTGGCAAAATTAAAGTAAGAGAGGGAGTCCTGAGGCTTATTAATGAACT TCATAACTCTGATATAGAACAATTTATTGTTACGACCAGTGGAAAAGATTCTCTTGATCCTTTTCTAAAAACCTCATTGA GTTCACATTTAAATTATTTTTCCGGATTTATTACATATGAAGATGTAAGCAGGCACAAGCCCTTCCCTGATGCATATAAG CTAGCGCTTAAATTAAGTAAGCAATCACAATTTAATTGCATAGCTATTGAGGACTCTAAGATTGGCGTTGAATCTGCTAA GGCAGCTAATCTTAATTGCCTTTTGATTTTGCCTCCGTGGAATAGTTCTAAGCAAAATATTTCTAAAAAAGCTAATGCAT GTTTAAATAGCCTTGGTAATTTTGATAATCCATCTAGGCTAATTTATGGTAAAAAGCTAATTAGTGATCATGTGGATTTT GATTATTTGACAAATATTATAAATTAA
Upstream 100 bases:
>100_bases TAATATCCATCGATTCACAAGGTCTTTATCTGTTTCCAAAAGCTTATCCTAGATTGATTCATTATTAATCAGAATTATAT TTGTTTTATACTGAAAAATC
Downstream 100 bases:
>100_bases AATGCAGAAAACTAAATTCAGAGAATTTATAGATTCACTGATTTTCATTATTAATCCAATTATCTCTGATTCATGGAGCA AGAGGAGTTTATTGCTTCTT
Product: putative CbbY-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MHKLKAVFWDVDGTIADTELCGHRVAFNLAFKDFDLDWNWNESQYLDLLKISGGFNRIIHYRNKIDSDITESKCSEIQAR KRIHYKKLIQSGKIKVREGVLRLINELHNSDIEQFIVTTSGKDSLDPFLKTSLSSHLNYFSGFITYEDVSRHKPFPDAYK LALKLSKQSQFNCIAIEDSKIGVESAKAANLNCLLILPPWNSSKQNISKKANACLNSLGNFDNPSRLIYGKKLISDHVDF DYLTNIIN
Sequences:
>Translated_248_residues MHKLKAVFWDVDGTIADTELCGHRVAFNLAFKDFDLDWNWNESQYLDLLKISGGFNRIIHYRNKIDSDITESKCSEIQAR KRIHYKKLIQSGKIKVREGVLRLINELHNSDIEQFIVTTSGKDSLDPFLKTSLSSHLNYFSGFITYEDVSRHKPFPDAYK LALKLSKQSQFNCIAIEDSKIGVESAKAANLNCLLILPPWNSSKQNISKKANACLNSLGNFDNPSRLIYGKKLISDHVDF DYLTNIIN >Mature_248_residues MHKLKAVFWDVDGTIADTELCGHRVAFNLAFKDFDLDWNWNESQYLDLLKISGGFNRIIHYRNKIDSDITESKCSEIQAR KRIHYKKLIQSGKIKVREGVLRLINELHNSDIEQFIVTTSGKDSLDPFLKTSLSSHLNYFSGFITYEDVSRHKPFPDAYK LALKLSKQSQFNCIAIEDSKIGVESAKAANLNCLLILPPWNSSKQNISKKANACLNSLGNFDNPSRLIYGKKLISDHVDF DYLTNIIN
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28334; Mature: 28334
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLKAVFWDVDGTIADTELCGHRVAFNLAFKDFDLDWNWNESQYLDLLKISGGFNRIIH CCCCEEEEEECCCCEEHHHHHCCEEEEEEEEEEECCCCCCCHHHHHEEEEECCCHHHHHH YRNKIDSDITESKCSEIQARKRIHYKKLIQSGKIKVREGVLRLINELHNSDIEQFIVTTS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHEEEECC GKDSLDPFLKTSLSSHLNYFSGFITYEDVSRHKPFPDAYKLALKLSKQSQFNCIAIEDSK CCCHHHHHHHHHHHHHHHHHHCEEEEHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCC IGVESAKAANLNCLLILPPWNSSKQNISKKANACLNSLGNFDNPSRLIYGKKLISDHVDF CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCH DYLTNIIN HHHHHHCC >Mature Secondary Structure MHKLKAVFWDVDGTIADTELCGHRVAFNLAFKDFDLDWNWNESQYLDLLKISGGFNRIIH CCCCEEEEEECCCCEEHHHHHCCEEEEEEEEEEECCCCCCCHHHHHEEEEECCCHHHHHH YRNKIDSDITESKCSEIQARKRIHYKKLIQSGKIKVREGVLRLINELHNSDIEQFIVTTS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHEEEECC GKDSLDPFLKTSLSSHLNYFSGFITYEDVSRHKPFPDAYKLALKLSKQSQFNCIAIEDSK CCCHHHHHHHHHHHHHHHHHHCEEEEHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCC IGVESAKAANLNCLLILPPWNSSKQNISKKANACLNSLGNFDNPSRLIYGKKLISDHVDF CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCH DYLTNIIN HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1429456 [H]