| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is ilvA [H]
Identifier: 124025678
GI number: 124025678
Start: 890875
End: 892410
Strand: Reverse
Name: ilvA [H]
Synonym: NATL1_09711
Alternate gene names: 124025678
Gene position: 892410-890875 (Counterclockwise)
Preceding gene: 124025680
Following gene: 124025677
Centisome position: 47.86
GC content: 37.37
Gene sequence:
>1536_bases ATGGAGGACTATTTACAGAAAATACTAAGAGCTCGCGTTTATGACGTTGCTGAAGAAACCCCACTAGAAAAGGCGAAAAA CTTAAGCAAAAAATTCGAAAATAACATTTGGTTTAAGAGAGAAGACCTTCAACCTGTCTTTTCATTCAAGTTAAGAGGTG CATTTAACCGCATGTCTCAGCTGAGCAAGGAAGAGCTAGATAAAGGAGTAATTGCATCAAGCGCTGGAAACCATGCACAG GGAGTTGCGTTAAGTGCATCATTCCTGAAATGCAGAGCAGTAATTGTTATGCCACTGACAACTCCCGTTATGAAAGTAAG GGCAGTTGAATCACACAAGGCAGAAGTTATTCTTTTCGGTGAAACTTATGATGAGTGCTATGAAAAGGCACTAGATATAT CTAAGAAAGAAAATCTAACTTTCATACATCCATTTGATGATCCTGAAGTCATAGCAGGACAAGGAACAATAGGTCTTGAA ATACTTAGACAAAGTCAAACTCCGCCTGATGCGATTTACATAGCTGTTGGAGGCGGGGGACTTATTGCTGGAGTAAGTGC GTACGTAAAAGCAATATGGCCAGATACAAAGATTATTGGTGTTGAACCAGAAGATGCCTGCGCAATGACACTTTCATTAA AGGCAAATGAACCTATTGAGCTTGAGAGTATTGGCCTTTTTGCAGACGGAGTTGCGGTAAGAAAGGTAGGAGAAAAGACT TTCTCGATTTGCAAAAAAAATGTTGATGAAATGGTTACTGTAAGTACAGACGAAATTTGTGCCGCGATAAAAGATGTTTT CGAGGATACAAGATCAATTCTTGAACCAGCAGGTGCATTATCTATAGCTGGCTTAAAAAAACATGTTGTAAATAATCAGT TAAAAAACAACAACCTTGTTGCAATAGCTTGTGGTGCAAATATGAATTTTGAACGACTAAGATTTGTAGCAGAAAGAGCC GAATTAGGTGAAGAAAAAGAAGCTATGATTGCAGTAGGAATTCCTGAAAAAGCGGGCAGTTTAAAACTTTTATGCAAAAC ACTTGGTTCACGGAGTCTAACTGAATTTAGTTACAGGATTTCAGAAGGTAAAACAGCTCAAATATTTATGGGTGTAGAAG TTTCGAATAACAATGATAGGGAATTATTAACAGCTGAGATCAAAAGGGGAGGTTTTGATTGTCATGATTTAAGTAATGAT GAATTATCAAAAGTTCATCTCAGGCATATGGTTGGTGGCAGGCTACCAAGATCAATAAGTCAAATATCTAAAGGAGAATA CATAGAATTACTATATAGATTTGAGTTTCCTGAAAGGCCTGGTGCCTTAATGAGATTTGTTAACTCAATGAGACCAGAGT GGACAATAAGCATCTTCCATTATCGAAACCATGGCGCTGATACTGGAAGAATAGTAATAGGTGTACTAGTAAACGATTCC GAGATTCAAGCTTGGAATGAGTTTGTCAAAAAAATAGGTTATAAAAATTGGGATGAGACAGATAATCCAGCATATAAATT ATTTTTAGGTGCATAG
Upstream 100 bases:
>100_bases CCTCCAATCTACGAGGTCTACCGTACATTTTGATAAAACTTGCACAAGAACAAATGGAATGTAGAAAACACAAGAATCAA AAATCGGTGAAAAACTAGAT
Downstream 100 bases:
>100_bases TTTAATTAGACGCGTTAATTTTGGATATACAGAAAAATAATTTTGGTTTTAATGTTATGAGTGAGAGCATACAAATTTCA TTACCAGCGAAGATTGAGGC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MEDYLQKILRARVYDVAEETPLEKAKNLSKKFENNIWFKREDLQPVFSFKLRGAFNRMSQLSKEELDKGVIASSAGNHAQ GVALSASFLKCRAVIVMPLTTPVMKVRAVESHKAEVILFGETYDECYEKALDISKKENLTFIHPFDDPEVIAGQGTIGLE ILRQSQTPPDAIYIAVGGGGLIAGVSAYVKAIWPDTKIIGVEPEDACAMTLSLKANEPIELESIGLFADGVAVRKVGEKT FSICKKNVDEMVTVSTDEICAAIKDVFEDTRSILEPAGALSIAGLKKHVVNNQLKNNNLVAIACGANMNFERLRFVAERA ELGEEKEAMIAVGIPEKAGSLKLLCKTLGSRSLTEFSYRISEGKTAQIFMGVEVSNNNDRELLTAEIKRGGFDCHDLSND ELSKVHLRHMVGGRLPRSISQISKGEYIELLYRFEFPERPGALMRFVNSMRPEWTISIFHYRNHGADTGRIVIGVLVNDS EIQAWNEFVKKIGYKNWDETDNPAYKLFLGA
Sequences:
>Translated_511_residues MEDYLQKILRARVYDVAEETPLEKAKNLSKKFENNIWFKREDLQPVFSFKLRGAFNRMSQLSKEELDKGVIASSAGNHAQ GVALSASFLKCRAVIVMPLTTPVMKVRAVESHKAEVILFGETYDECYEKALDISKKENLTFIHPFDDPEVIAGQGTIGLE ILRQSQTPPDAIYIAVGGGGLIAGVSAYVKAIWPDTKIIGVEPEDACAMTLSLKANEPIELESIGLFADGVAVRKVGEKT FSICKKNVDEMVTVSTDEICAAIKDVFEDTRSILEPAGALSIAGLKKHVVNNQLKNNNLVAIACGANMNFERLRFVAERA ELGEEKEAMIAVGIPEKAGSLKLLCKTLGSRSLTEFSYRISEGKTAQIFMGVEVSNNNDRELLTAEIKRGGFDCHDLSND ELSKVHLRHMVGGRLPRSISQISKGEYIELLYRFEFPERPGALMRFVNSMRPEWTISIFHYRNHGADTGRIVIGVLVNDS EIQAWNEFVKKIGYKNWDETDNPAYKLFLGA >Mature_511_residues MEDYLQKILRARVYDVAEETPLEKAKNLSKKFENNIWFKREDLQPVFSFKLRGAFNRMSQLSKEELDKGVIASSAGNHAQ GVALSASFLKCRAVIVMPLTTPVMKVRAVESHKAEVILFGETYDECYEKALDISKKENLTFIHPFDDPEVIAGQGTIGLE ILRQSQTPPDAIYIAVGGGGLIAGVSAYVKAIWPDTKIIGVEPEDACAMTLSLKANEPIELESIGLFADGVAVRKVGEKT FSICKKNVDEMVTVSTDEICAAIKDVFEDTRSILEPAGALSIAGLKKHVVNNQLKNNNLVAIACGANMNFERLRFVAERA ELGEEKEAMIAVGIPEKAGSLKLLCKTLGSRSLTEFSYRISEGKTAQIFMGVEVSNNNDRELLTAEIKRGGFDCHDLSND ELSKVHLRHMVGGRLPRSISQISKGEYIELLYRFEFPERPGALMRFVNSMRPEWTISIFHYRNHGADTGRIVIGVLVNDS EIQAWNEFVKKIGYKNWDETDNPAYKLFLGA
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=305, Percent_Identity=33.4426229508197, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI33469958, Length=311, Percent_Identity=30.2250803858521, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI19923959, Length=316, Percent_Identity=28.1645569620253, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1790207, Length=508, Percent_Identity=46.6535433070866, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI1789505, Length=305, Percent_Identity=38.3606557377049, Blast_Score=178, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17537387, Length=341, Percent_Identity=36.0703812316716, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71991565, Length=332, Percent_Identity=34.6385542168675, Blast_Score=158, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17508781, Length=288, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6320930, Length=527, Percent_Identity=46.1100569259962, Blast_Score=445, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=34.983498349835, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6319788, Length=326, Percent_Identity=25.4601226993865, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355833, Length=332, Percent_Identity=35.5421686746988, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24645328, Length=253, Percent_Identity=35.9683794466403, Blast_Score=119, Evalue=7e-27,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56806; Mature: 56806
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDYLQKILRARVYDVAEETPLEKAKNLSKKFENNIWFKREDLQPVFSFKLRGAFNRMSQ CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHH LSKEELDKGVIASSAGNHAQGVALSASFLKCRAVIVMPLTTPVMKVRAVESHKAEVILFG HHHHHHCCCCEECCCCCCCCCEEEHHHHHEEEEEEEEECCCHHHHHEECCCCCCEEEEEE ETYDECYEKALDISKKENLTFIHPFDDPEVIAGQGTIGLEILRQSQTPPDAIYIAVGGGG CCHHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHCCCCCCCEEEEEECCCH LIAGVSAYVKAIWPDTKIIGVEPEDACAMTLSLKANEPIELESIGLFADGVAVRKVGEKT HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCEEECCHHHHHHHHHH FSICKKNVDEMVTVSTDEICAAIKDVFEDTRSILEPAGALSIAGLKKHVVNNQLKNNNLV HHHHHHCHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEE AIACGANMNFERLRFVAERAELGEEKEAMIAVGIPEKAGSLKLLCKTLGSRSLTEFSYRI EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHEEE SEGKTAQIFMGVEVSNNNDRELLTAEIKRGGFDCHDLSNDELSKVHLRHMVGGRLPRSIS CCCCEEEEEEEEEECCCCCCHHEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH QISKGEYIELLYRFEFPERPGALMRFVNSMRPEWTISIFHYRNHGADTGRIVIGVLVNDS HHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEECCC EIQAWNEFVKKIGYKNWDETDNPAYKLFLGA HHHHHHHHHHHCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MEDYLQKILRARVYDVAEETPLEKAKNLSKKFENNIWFKREDLQPVFSFKLRGAFNRMSQ CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHH LSKEELDKGVIASSAGNHAQGVALSASFLKCRAVIVMPLTTPVMKVRAVESHKAEVILFG HHHHHHCCCCEECCCCCCCCCEEEHHHHHEEEEEEEEECCCHHHHHEECCCCCCEEEEEE ETYDECYEKALDISKKENLTFIHPFDDPEVIAGQGTIGLEILRQSQTPPDAIYIAVGGGG CCHHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHCCCCCCCEEEEEECCCH LIAGVSAYVKAIWPDTKIIGVEPEDACAMTLSLKANEPIELESIGLFADGVAVRKVGEKT HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCEEECCHHHHHHHHHH FSICKKNVDEMVTVSTDEICAAIKDVFEDTRSILEPAGALSIAGLKKHVVNNQLKNNNLV HHHHHHCHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEE AIACGANMNFERLRFVAERAELGEEKEAMIAVGIPEKAGSLKLLCKTLGSRSLTEFSYRI EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHEEE SEGKTAQIFMGVEVSNNNDRELLTAEIKRGGFDCHDLSNDELSKVHLRHMVGGRLPRSIS CCCCEEEEEEEEEECCCCCCHHEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH QISKGEYIELLYRFEFPERPGALMRFVNSMRPEWTISIFHYRNHGADTGRIVIGVLVNDS HHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEECCC EIQAWNEFVKKIGYKNWDETDNPAYKLFLGA HHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA