| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025620
Identifier: 124025620
GI number: 124025620
Start: 843955
End: 845142
Strand: Reverse
Name: 124025620
Synonym: NATL1_09131
Alternate gene names: NA
Gene position: 845142-843955 (Counterclockwise)
Preceding gene: 124025626
Following gene: 124025617
Centisome position: 45.32
GC content: 37.04
Gene sequence:
>1188_bases ATGGACTTTCAGCAGGGTTTAATCACAACTATTCATGAGTACGGATTAGCAAAAGATCCAGTATCTCAATTAAATAAAGA GCTATTAAAACGGCCAACATCAATACTTATTCCATGCCTATTCGATGAATTCAGTAGGCCAGCATTAAAACTTATAAGAA GCACTTTAAAAGAATTAAGAAATTTAAATCAACTAGTCATAGCCTTATCTGCAAGTAATAAAGAGGATGTGGCTAAGGCT AGGGATTTCTTTAAAGAAATGCCATATCCAGTCCACGTCCAATGGACTAATAGTCCGGCGGTTATTGAATTGCTAAAAGA CCAAGAGAAGAATGGATTAGATCTCTTAGGTGTTCCAGGAAAAGGATGGGCAGTATGGCAAGGAGTGGGTGTGGCAACAA AAAGCTCAGAAGTAGTAGCACTTTTCGATGCTGATATAAGAACATTCAACTCCAATTATCCAGCAAGAATGTTGGGACCT TTATTAGAAAAGTCAAATGGGATTTCTTATGTAAAAGCTTTTTACAGCCGCCTATCTCTTGAGACAAATGCTCTTCAAGG TAGAGCTACACGATTATTTGTAGGACCACTTCTATCAAGCTTGGAACAATTGATAGGTAATGCGCCATTCCTCCAATATT TACAGTCTTTTAGATATCCATTAGCTGGAGAATTTGCTTTTACTACTGATTTAGCAATGAATTTAAGAATCCCATGCGAC TGGGGATTAGAGATAGGGCTACTCTCTGAGGTTTATAAAAACGTAAGGATATCAAGAATCGCACAAGTGGATCTCGGTAT TTTCGACCACAAACACAAAGAAATTGGTTCAAAGCCTAATGAAGGCCTCCAAAAAATGTCTACAGAAATTCTTTCAAGTG TTTTAAGAGGGTTAATGGAACATGAAGCAAGAACACTTACGAGTTCTCAATTAGCAAACTTGGAGGTTTTATATAGAAGA GCAGGAGAAGATAGAGTTAAACAATTTAGTTTAGATTCCTCAGTTAATCAATTGCCGTACAGTAGACATAAAGAAGAACT AGCAGTTCATACTTTTGGAAAACTATTAAGGCCTGCCATCAATCAATTCCTTGAATCACCTGTAAAGCAGCAATTACCAT GTTGGGCAAGAGTTCTAGACTGTGAGAGTAAATTACAAGATGATTTAGAAAAAGCAGGCAGCTCATAA
Upstream 100 bases:
>100_bases CTCGTCTAATTCACTATCCAACTCAGACACTCTTTAAAGAAAACGATCATCTCTACCTCATCGTAGCTCCCACCTTGAAT CTGTAAAACTTTTTTCTTGA
Downstream 100 bases:
>100_bases AAAACCTTTAACTAGCAATGAAATTCCAACAGAAAAAGAGACTAATTCAAAAACAACTTTGATAAACTTGGTCCCTTTAA TTATTGAGAACTTAGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Glucosyl-3-Phosphoglycerate Synthase; Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Group 2 Family Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyltransferase Family Protein; Family 2 Glycosyltransferase; Family 2 Glycosyl Transferase Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MDFQQGLITTIHEYGLAKDPVSQLNKELLKRPTSILIPCLFDEFSRPALKLIRSTLKELRNLNQLVIALSASNKEDVAKA RDFFKEMPYPVHVQWTNSPAVIELLKDQEKNGLDLLGVPGKGWAVWQGVGVATKSSEVVALFDADIRTFNSNYPARMLGP LLEKSNGISYVKAFYSRLSLETNALQGRATRLFVGPLLSSLEQLIGNAPFLQYLQSFRYPLAGEFAFTTDLAMNLRIPCD WGLEIGLLSEVYKNVRISRIAQVDLGIFDHKHKEIGSKPNEGLQKMSTEILSSVLRGLMEHEARTLTSSQLANLEVLYRR AGEDRVKQFSLDSSVNQLPYSRHKEELAVHTFGKLLRPAINQFLESPVKQQLPCWARVLDCESKLQDDLEKAGSS
Sequences:
>Translated_395_residues MDFQQGLITTIHEYGLAKDPVSQLNKELLKRPTSILIPCLFDEFSRPALKLIRSTLKELRNLNQLVIALSASNKEDVAKA RDFFKEMPYPVHVQWTNSPAVIELLKDQEKNGLDLLGVPGKGWAVWQGVGVATKSSEVVALFDADIRTFNSNYPARMLGP LLEKSNGISYVKAFYSRLSLETNALQGRATRLFVGPLLSSLEQLIGNAPFLQYLQSFRYPLAGEFAFTTDLAMNLRIPCD WGLEIGLLSEVYKNVRISRIAQVDLGIFDHKHKEIGSKPNEGLQKMSTEILSSVLRGLMEHEARTLTSSQLANLEVLYRR AGEDRVKQFSLDSSVNQLPYSRHKEELAVHTFGKLLRPAINQFLESPVKQQLPCWARVLDCESKLQDDLEKAGSS >Mature_395_residues MDFQQGLITTIHEYGLAKDPVSQLNKELLKRPTSILIPCLFDEFSRPALKLIRSTLKELRNLNQLVIALSASNKEDVAKA RDFFKEMPYPVHVQWTNSPAVIELLKDQEKNGLDLLGVPGKGWAVWQGVGVATKSSEVVALFDADIRTFNSNYPARMLGP LLEKSNGISYVKAFYSRLSLETNALQGRATRLFVGPLLSSLEQLIGNAPFLQYLQSFRYPLAGEFAFTTDLAMNLRIPCD WGLEIGLLSEVYKNVRISRIAQVDLGIFDHKHKEIGSKPNEGLQKMSTEILSSVLRGLMEHEARTLTSSQLANLEVLYRR AGEDRVKQFSLDSSVNQLPYSRHKEELAVHTFGKLLRPAINQFLESPVKQQLPCWARVLDCESKLQDDLEKAGSS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44390; Mature: 44390
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFQQGLITTIHEYGLAKDPVSQLNKELLKRPTSILIPCLFDEFSRPALKLIRSTLKELR CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH NLNQLVIALSASNKEDVAKARDFFKEMPYPVHVQWTNSPAVIELLKDQEKNGLDLLGVPG CHHHEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCEEEECCC KGWAVWQGVGVATKSSEVVALFDADIRTFNSNYPARMLGPLLEKSNGISYVKAFYSRLSL CCCEEEECCCCEECCCCEEEEEECHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC ETNALQGRATRLFVGPLLSSLEQLIGNAPFLQYLQSFRYPLAGEFAFTTDLAMNLRIPCD HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHEEEEECCCC WGLEIGLLSEVYKNVRISRIAQVDLGIFDHKHKEIGSKPNEGLQKMSTEILSSVLRGLME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH HEARTLTSSQLANLEVLYRRAGEDRVKQFSLDSSVNQLPYSRHKEELAVHTFGKLLRPAI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NQFLESPVKQQLPCWARVLDCESKLQDDLEKAGSS HHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDFQQGLITTIHEYGLAKDPVSQLNKELLKRPTSILIPCLFDEFSRPALKLIRSTLKELR CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH NLNQLVIALSASNKEDVAKARDFFKEMPYPVHVQWTNSPAVIELLKDQEKNGLDLLGVPG CHHHEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCEEEECCC KGWAVWQGVGVATKSSEVVALFDADIRTFNSNYPARMLGPLLEKSNGISYVKAFYSRLSL CCCEEEECCCCEECCCCEEEEEECHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC ETNALQGRATRLFVGPLLSSLEQLIGNAPFLQYLQSFRYPLAGEFAFTTDLAMNLRIPCD HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHEEEEECCCC WGLEIGLLSEVYKNVRISRIAQVDLGIFDHKHKEIGSKPNEGLQKMSTEILSSVLRGLME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH HEARTLTSSQLANLEVLYRRAGEDRVKQFSLDSSVNQLPYSRHKEELAVHTFGKLLRPAI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NQFLESPVKQQLPCWARVLDCESKLQDDLEKAGSS HHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA