Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025216

Identifier: 124025216

GI number: 124025216

Start: 460537

End: 461010

Strand: Direct

Name: 124025216

Synonym: NATL1_05051

Alternate gene names: NA

Gene position: 460537-461010 (Clockwise)

Preceding gene: 124025215

Following gene: 124025218

Centisome position: 24.7

GC content: 31.22

Gene sequence:

>474_bases
TTGGAGTCTAGAAAGTATCAACTACAAAAACAAATTATAGAAGCTCTGAAGGCTAACGATAATGATTTATATTCTCTACT
GAAATCTCAATGGGCTCATCGTTTTGGAGTAGATAGCTTGGAAGAACTGAAAAGCCTAGATTTAGAACAGTTAAATCAAA
CCCCAAATAATGTAGATAATCAAAAAATAGATCAATCACAAGAAAATTCTTTCGAGGGTGAAAAAGAAACTTCTATCAAA
GACGATGAAAATCATTCAAAAGAAATAATCAACAAAGAAGTTGATGAGTCAGTTAAGGATGAGAATGATAAATCTTTTAC
AATTACATCTTATTCAATAGCTGACAAAGAAAATGACGAAGATAAAACTATAAACCCATACAAAGACAGTAGAAGTCAGC
CTGAAATTAAAGCTTTGATTCCTTTGCCTCCTAAACCTAAATATAGTTATCTCAAGAAGTGGTTGTTGAGATAA

Upstream 100 bases:

>100_bases
CAATTCTATTAATTCTTACTGTTGGATTATTTTTTCTTATCAGACCTCTTTTAAATCGCAAACTTGCTTGATAATCTTAA
TTTAGCGATTTAAAAGAACC

Downstream 100 bases:

>100_bases
TAAGTTCTAAATTAGTTTTTACTAATTTCTAATTCTTTAATTTGAGATTGTAGAATTTTTTATTTTCTTACATCATTCCA
GGCATTCCCATACCGCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MESRKYQLQKQIIEALKANDNDLYSLLKSQWAHRFGVDSLEELKSLDLEQLNQTPNNVDNQKIDQSQENSFEGEKETSIK
DDENHSKEIINKEVDESVKDENDKSFTITSYSIADKENDEDKTINPYKDSRSQPEIKALIPLPPKPKYSYLKKWLLR

Sequences:

>Translated_157_residues
MESRKYQLQKQIIEALKANDNDLYSLLKSQWAHRFGVDSLEELKSLDLEQLNQTPNNVDNQKIDQSQENSFEGEKETSIK
DDENHSKEIINKEVDESVKDENDKSFTITSYSIADKENDEDKTINPYKDSRSQPEIKALIPLPPKPKYSYLKKWLLR
>Mature_157_residues
MESRKYQLQKQIIEALKANDNDLYSLLKSQWAHRFGVDSLEELKSLDLEQLNQTPNNVDNQKIDQSQENSFEGEKETSIK
DDENHSKEIINKEVDESVKDENDKSFTITSYSIADKENDEDKTINPYKDSRSQPEIKALIPLPPKPKYSYLKKWLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18363; Mature: 18363

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRKYQLQKQIIEALKANDNDLYSLLKSQWAHRFGVDSLEELKSLDLEQLNQTPNNVDN
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCH
QKIDQSQENSFEGEKETSIKDDENHSKEIINKEVDESVKDENDKSFTITSYSIADKENDE
HHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
DKTINPYKDSRSQPEIKALIPLPPKPKYSYLKKWLLR
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MESRKYQLQKQIIEALKANDNDLYSLLKSQWAHRFGVDSLEELKSLDLEQLNQTPNNVDN
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCH
QKIDQSQENSFEGEKETSIKDDENHSKEIINKEVDESVKDENDKSFTITSYSIADKENDE
HHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
DKTINPYKDSRSQPEIKALIPLPPKPKYSYLKKWLLR
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA