| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025204
Identifier: 124025204
GI number: 124025204
Start: 449218
End: 449904
Strand: Direct
Name: 124025204
Synonym: NATL1_04931
Alternate gene names: NA
Gene position: 449218-449904 (Clockwise)
Preceding gene: 124025203
Following gene: 124025205
Centisome position: 24.09
GC content: 38.28
Gene sequence:
>687_bases TTGAACTTAGATAATAAAAACTCTTTAAAAAGTAGATCTCTTTATAAAGCCCCTCTAAGTAAGAGACAAGCTTTGAAAAT CGTTGAGTCCTCTTATCTTGCGGCTGCAACAGCTTTGATTTGGATAGCTCTTTATTATTTGCCTATTGGCGGAGCTGTTT TTCGTCTTGCTTTACCATTGCCATTGGCTCTTCTTCAAATTCGGAGAGGTGTCAAAACAGGTATTGAGGGAGTGACAATA TGCGTAATGCTATTAACTGCTCTGATGGGTCCGCTAAGAGGACCTTTAGTGCTTTTTCCGTATGGATTGCTTTCCTTATG GTTAGGATATTGTTGGGAAAAGGGATGGAATTGGTGGTTAAGTTGGAGTGTTGGAGTCTCGATTGGAACGATGGGTTTTC TTGTTAGGGTTTTCGTTTTGTCTTTGTTGGTTGGTGAGAATCTATGGGTTATTCTTACTCGTGCTGGAGCGGGATTGCTT GAAAAGGGAATAGATATTTTTAATCTTTCTTTTACTCCCGATATGAGACAAGTTCAAATAGTTGCACTATGTCTAATTAT TACTCAAGAAATCATTTACGTTCTATGTTTGCATGCTTTGGCTTATTGGATTTTCCCTAGACTTAAGTCATCGATACCTG AACCACCCGCTTTGCTAGAAAAATTAATTTCTCTAGAATCTAACTGA
Upstream 100 bases:
>100_bases AGGCTCTAAGAACTGCAGGTGTCCAATTTGAGGTGGAGAAGATCGAACGTTTTGATAAGGAGGATTTGTCAAAGGATTCA TCTTTTAAAAGATAATAATT
Downstream 100 bases:
>100_bases TTAAATATGACTGGAGACAACTACGTTTTGTTGCCGTCAAGAGTTTTGGCTTTTGGTGAAGGCCTCCATGAGCAAAATGT TGAAGAAAGAGTTCAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNLDNKNSLKSRSLYKAPLSKRQALKIVESSYLAAATALIWIALYYLPIGGAVFRLALPLPLALLQIRRGVKTGIEGVTI CVMLLTALMGPLRGPLVLFPYGLLSLWLGYCWEKGWNWWLSWSVGVSIGTMGFLVRVFVLSLLVGENLWVILTRAGAGLL EKGIDIFNLSFTPDMRQVQIVALCLIITQEIIYVLCLHALAYWIFPRLKSSIPEPPALLEKLISLESN
Sequences:
>Translated_228_residues MNLDNKNSLKSRSLYKAPLSKRQALKIVESSYLAAATALIWIALYYLPIGGAVFRLALPLPLALLQIRRGVKTGIEGVTI CVMLLTALMGPLRGPLVLFPYGLLSLWLGYCWEKGWNWWLSWSVGVSIGTMGFLVRVFVLSLLVGENLWVILTRAGAGLL EKGIDIFNLSFTPDMRQVQIVALCLIITQEIIYVLCLHALAYWIFPRLKSSIPEPPALLEKLISLESN >Mature_228_residues MNLDNKNSLKSRSLYKAPLSKRQALKIVESSYLAAATALIWIALYYLPIGGAVFRLALPLPLALLQIRRGVKTGIEGVTI CVMLLTALMGPLRGPLVLFPYGLLSLWLGYCWEKGWNWWLSWSVGVSIGTMGFLVRVFVLSLLVGENLWVILTRAGAGLL EKGIDIFNLSFTPDMRQVQIVALCLIITQEIIYVLCLHALAYWIFPRLKSSIPEPPALLEKLISLESN
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25400; Mature: 25400
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDNKNSLKSRSLYKAPLSKRQALKIVESSYLAAATALIWIALYYLPIGGAVFRLALPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH PLALLQIRRGVKTGIEGVTICVMLLTALMGPLRGPLVLFPYGLLSLWLGYCWEKGWNWWL HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE SWSVGVSIGTMGFLVRVFVLSLLVGENLWVILTRAGAGLLEKGIDIFNLSFTPDMRQVQI EEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCEEEECCCCCHHHHHH VALCLIITQEIIYVLCLHALAYWIFPRLKSSIPEPPALLEKLISLESN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNLDNKNSLKSRSLYKAPLSKRQALKIVESSYLAAATALIWIALYYLPIGGAVFRLALPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH PLALLQIRRGVKTGIEGVTICVMLLTALMGPLRGPLVLFPYGLLSLWLGYCWEKGWNWWL HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE SWSVGVSIGTMGFLVRVFVLSLLVGENLWVILTRAGAGLLEKGIDIFNLSFTPDMRQVQI EEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCEEEECCCCCHHHHHH VALCLIITQEIIYVLCLHALAYWIFPRLKSSIPEPPALLEKLISLESN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA