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The map label for this gene is dppC [H]

Identifier: 124025190

GI number: 124025190

Start: 434229

End: 434987

Strand: Direct

Name: dppC [H]

Synonym: NATL1_04771

Alternate gene names: 124025190

Gene position: 434229-434987 (Clockwise)

Preceding gene: 124025187

Following gene: 124025193

Centisome position: 23.29

GC content: 39.66

Gene sequence:

>759_bases
ATGCCACTATTAATAACTTTAAAGATTGTACCTAATGGTGAATTTGGGTTAGGTAACCCGATTTTCTCGGCTCCATCTAT
AGATCACTGGTGTGGAACTGACCGACTAGGAAGAGATGTTTGTATTAGAACTTTGGCTGCGAGTGGAGTTGCGTTACAAG
TTGTTTTTATTGCCGTATCTCTTGCCGTTCTCGTAGGAATTCCTTTGGGACTTTTAAGTGGCTATATCGGTGGGCTTTTA
GATAGGGTTTTGGTGCTTTTCATGGATACTCTTTATACAATTCCTGTCCTTCTGCTTTCTGTTGTGATGGCATTTTTATT
GGGTAGAGGCATATTGAATGCATCAATAGCATTGTGCGTCGTTTATATTCCTCAATATTTTCGACTTGTTAGGAATCAGA
CTTCACAGGTTAAATCAGAACTTTATATTGAGGCAGCAATATCAATGGGAGCATCCCCTTTGTGGGTAATAAGAAAGTAC
CTTCTTAAAAATGTTCTTACTTCTGTCCCTGTGGTTTTAACACTTAATGCTGCAGACGCTGTATTAGTTCTTGGGGGATT
GGGATTTCTTGGATTAGGTCTTCCTGAGAATATTCCAGAATGGGGAAGTGATTTAAATATGGCATTAGTTGCATTGCCTA
CTGGTATCTGGTGGACAGCGATCTATCCTGGTATGGCTATGTTCGTGTTAGTGCTGGGACTGTCTTTTATTGGAGAAGGC
TTGGAGAAAATTTTAAGTGAAACTAGTCTTCAGGATTAA

Upstream 100 bases:

>100_bases
ATTGAATTTAAGAGGTTTTTTAAGACGAAAGAATTTGTCGTCACGGTTATTTTTCGCTGGGCTGATAATTTTATCCATAT
ATATAGGCATCTCTATTTTT

Downstream 100 bases:

>100_bases
AACTTACTTCTGGTTTGGAATTTAATATCTCATTTTTTCTGTTCTTGGGAGATTATCTATAATTTCACCTTTATCATTAA
GTTCTGGATATTTTCTGCCT

Product: putative ABC transporter, oligopeptides

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPLLITLKIVPNGEFGLGNPIFSAPSIDHWCGTDRLGRDVCIRTLAASGVALQVVFIAVSLAVLVGIPLGLLSGYIGGLL
DRVLVLFMDTLYTIPVLLLSVVMAFLLGRGILNASIALCVVYIPQYFRLVRNQTSQVKSELYIEAAISMGASPLWVIRKY
LLKNVLTSVPVVLTLNAADAVLVLGGLGFLGLGLPENIPEWGSDLNMALVALPTGIWWTAIYPGMAMFVLVLGLSFIGEG
LEKILSETSLQD

Sequences:

>Translated_252_residues
MPLLITLKIVPNGEFGLGNPIFSAPSIDHWCGTDRLGRDVCIRTLAASGVALQVVFIAVSLAVLVGIPLGLLSGYIGGLL
DRVLVLFMDTLYTIPVLLLSVVMAFLLGRGILNASIALCVVYIPQYFRLVRNQTSQVKSELYIEAAISMGASPLWVIRKY
LLKNVLTSVPVVLTLNAADAVLVLGGLGFLGLGLPENIPEWGSDLNMALVALPTGIWWTAIYPGMAMFVLVLGLSFIGEG
LEKILSETSLQD
>Mature_251_residues
PLLITLKIVPNGEFGLGNPIFSAPSIDHWCGTDRLGRDVCIRTLAASGVALQVVFIAVSLAVLVGIPLGLLSGYIGGLLD
RVLVLFMDTLYTIPVLLLSVVMAFLLGRGILNASIALCVVYIPQYFRLVRNQTSQVKSELYIEAAISMGASPLWVIRKYL
LKNVLTSVPVVLTLNAADAVLVLGGLGFLGLGLPENIPEWGSDLNMALVALPTGIWWTAIYPGMAMFVLVLGLSFIGEGL
EKILSETSLQD

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=227, Percent_Identity=36.1233480176211, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787760, Length=229, Percent_Identity=34.9344978165939, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=31.4159292035398, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1789964, Length=226, Percent_Identity=33.6283185840708, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787549, Length=221, Percent_Identity=32.579185520362, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787498, Length=226, Percent_Identity=31.858407079646, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788505, Length=238, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26982; Mature: 26851

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLITLKIVPNGEFGLGNPIFSAPSIDHWCGTDRLGRDVCIRTLAASGVALQVVFIAVS
CCEEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
LAVLVGIPLGLLSGYIGGLLDRVLVLFMDTLYTIPVLLLSVVMAFLLGRGILNASIALCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VYIPQYFRLVRNQTSQVKSELYIEAAISMGASPLWVIRKYLLKNVLTSVPVVLTLNAADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHH
VLVLGGLGFLGLGLPENIPEWGSDLNMALVALPTGIWWTAIYPGMAMFVLVLGLSFIGEG
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEKILSETSLQD
HHHHHHHCCCCC
>Mature Secondary Structure 
PLLITLKIVPNGEFGLGNPIFSAPSIDHWCGTDRLGRDVCIRTLAASGVALQVVFIAVS
CEEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
LAVLVGIPLGLLSGYIGGLLDRVLVLFMDTLYTIPVLLLSVVMAFLLGRGILNASIALCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VYIPQYFRLVRNQTSQVKSELYIEAAISMGASPLWVIRKYLLKNVLTSVPVVLTLNAADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHH
VLVLGGLGFLGLGLPENIPEWGSDLNMALVALPTGIWWTAIYPGMAMFVLVLGLSFIGEG
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEKILSETSLQD
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]