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The map label for this gene is sua5 [H]

Identifier: 124025123

GI number: 124025123

Start: 376919

End: 377518

Strand: Direct

Name: sua5 [H]

Synonym: NATL1_04101

Alternate gene names: 124025123

Gene position: 376919-377518 (Clockwise)

Preceding gene: 124025122

Following gene: 124025124

Centisome position: 20.21

GC content: 38.67

Gene sequence:

>600_bases
ATGCAATTTGTCGCAGAAAATGAAATGATCACCCAGCAATTTGGAATCTTTGACTTGGCTTTAAAGTTGAAAAAGGGATC
TTTAGCTTTATTTCCTACTGATACTTTGCCAGCACTGTGTTCATACCCAAAATACTCAAAAAAAATTTGGACTATTAAGA
AAAGGCCTTCAAGTAAGCCACTTATCCTGATGGGAGGTTGCTCGGATGATTTGTTTGAATTTGTTCATCCTTGTGCTTTG
GAAGAAAGCTTGCAATTGGCAAAAATCTATTGGCCTGGAGCATTAACAATGGTTTTGCCAACAATAGGCAATTTTTCTAA
ATATTTGAATGGTAATTCAAATGCTGTTGGTTTCAGAGTCCCCGCACTAAGAATTGCAAGAGATTTGCTTATGCAAACAG
GTCCTCTTGCAACTACAAGTGCAAACATTTCTGGAGAAACACCTGTCAAAGATGCAATGGAAGCTTCGATTCAATTTCCG
GAGATTCCAATACTGGCTCCTATCCCTTGGCCAAGTTCTTCTGGCATGGCAAGCACAGTTGTTGAATGGAAAAATGGAAA
GTGGAATTTGTTAAGGCCTGGTTCAGTCGTTTTGAAATAA

Upstream 100 bases:

>100_bases
GAACATCATTATGATCAAAGTGAAAAGATAACTAGTTTTATGAGGAATATTGGAATGGAAGAAGTTTCATTTGAAAAAGA
TATAAGTGGAATCAAGCGCT

Downstream 100 bases:

>100_bases
AAGTAACGAATGATTTATCTGTTTTTAATGGTTTTGATAGTGCAATCTATTTTTTGGTGGCTTTTTAGACTCCCCATAAT
GAGTTTTGATTGGATTTTTC

Product: putative translation factor (SUA5)

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQFVAENEMITQQFGIFDLALKLKKGSLALFPTDTLPALCSYPKYSKKIWTIKKRPSSKPLILMGGCSDDLFEFVHPCAL
EESLQLAKIYWPGALTMVLPTIGNFSKYLNGNSNAVGFRVPALRIARDLLMQTGPLATTSANISGETPVKDAMEASIQFP
EIPILAPIPWPSSSGMASTVVEWKNGKWNLLRPGSVVLK

Sequences:

>Translated_199_residues
MQFVAENEMITQQFGIFDLALKLKKGSLALFPTDTLPALCSYPKYSKKIWTIKKRPSSKPLILMGGCSDDLFEFVHPCAL
EESLQLAKIYWPGALTMVLPTIGNFSKYLNGNSNAVGFRVPALRIARDLLMQTGPLATTSANISGETPVKDAMEASIQFP
EIPILAPIPWPSSSGMASTVVEWKNGKWNLLRPGSVVLK
>Mature_199_residues
MQFVAENEMITQQFGIFDLALKLKKGSLALFPTDTLPALCSYPKYSKKIWTIKKRPSSKPLILMGGCSDDLFEFVHPCAL
EESLQLAKIYWPGALTMVLPTIGNFSKYLNGNSNAVGFRVPALRIARDLLMQTGPLATTSANISGETPVKDAMEASIQFP
EIPILAPIPWPSSSGMASTVVEWKNGKWNLLRPGSVVLK

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 21830; Mature: 21830

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFVAENEMITQQFGIFDLALKLKKGSLALFPTDTLPALCSYPKYSKKIWTIKKRPSSKP
CCCCCCCCHHHHHCCCEEEEEEEECCCEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCC
LILMGGCSDDLFEFVHPCALEESLQLAKIYWPGALTMVLPTIGNFSKYLNGNSNAVGFRV
EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCHHHHHCCCCCEEEEEC
PALRIARDLLMQTGPLATTSANISGETPVKDAMEASIQFPEIPILAPIPWPSSSGMASTV
HHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEE
VEWKNGKWNLLRPGSVVLK
EEECCCEEEEECCCCEEEC
>Mature Secondary Structure
MQFVAENEMITQQFGIFDLALKLKKGSLALFPTDTLPALCSYPKYSKKIWTIKKRPSSKP
CCCCCCCCHHHHHCCCEEEEEEEECCCEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCC
LILMGGCSDDLFEFVHPCALEESLQLAKIYWPGALTMVLPTIGNFSKYLNGNSNAVGFRV
EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCHHHHHCCCCCEEEEEC
PALRIARDLLMQTGPLATTSANISGETPVKDAMEASIQFPEIPILAPIPWPSSSGMASTV
HHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEE
VEWKNGKWNLLRPGSVVLK
EEECCCEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA