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The map label for this gene is psbM

Identifier: 124025120

GI number: 124025120

Start: 375320

End: 375478

Strand: Direct

Name: psbM

Synonym: NATL1_04071

Alternate gene names: 124025120

Gene position: 375320-375478 (Clockwise)

Preceding gene: 124025119

Following gene: 124025121

Centisome position: 20.13

GC content: 38.36

Gene sequence:

>159_bases
ATGGAAACCACTAGTTTTGGCTTTGCCGCAAGTCTTTTATTTGTTGGAGTACCAACTATTTTTCTTATCGGTTTATTTGT
TTCTACCAGTGATGGTGAGAAATCAAGCTTTTATTCTGATACCAGCAAGGGTAGATTGAGCCCAGAGCCTAAAAAGTGA

Upstream 100 bases:

>100_bases
ATTACAAAATCTCAGTCTCTTTGATTTAAAACCCAGTTTTTCTGCTGAAGGGATATATAGTTTATTTTAGTAAAATTTGT
TCTGAGTAAAAACCTCGGTT

Downstream 100 bases:

>100_bases
TTTAGGACTTTTCTACTCAAAGATCTCAAGTTTTTGCTCGAGCTCAATATCAATATTGAGGCTTTACCGTAAAGGTATTG
CTTCAAACTTTTAATATAAA

Product: photosystem II reaction center protein M

Products: NA

Alternate protein names: PSII-M

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
METTSFGFAASLLFVGVPTIFLIGLFVSTSDGEKSSFYSDTSKGRLSPEPKK

Sequences:

>Translated_52_residues
METTSFGFAASLLFVGVPTIFLIGLFVSTSDGEKSSFYSDTSKGRLSPEPKK
>Mature_52_residues
METTSFGFAASLLFVGVPTIFLIGLFVSTSDGEKSSFYSDTSKGRLSPEPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBM_PROM1 (A2C0G1)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014236.1
- STRING:   A2C0G1
- GeneID:   4779365
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_04071
- HOGENOM:   HBG635643
- OMA:   FFSDSSK
- ProtClustDB:   PRK14094
- BioCyc:   PMAR167555:NATL1_04071-MONOMER
- HAMAP:   MF_00438
- InterPro:   IPR007826
- TIGRFAMs:   TIGR03038

Pfam domain/function: PF05151 PsbM

EC number: NA

Molecular weight: Translated: 5579; Mature: 5579

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ee263bc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTSFGFAASLLFVGVPTIFLIGLFVSTSDGEKSSFYSDTSKGRLSPEPKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
METTSFGFAASLLFVGVPTIFLIGLFVSTSDGEKSSFYSDTSKGRLSPEPKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA