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The map label for this gene is ybhK [C]

Identifier: 124025084

GI number: 124025084

Start: 344357

End: 345754

Strand: Direct

Name: ybhK [C]

Synonym: NATL1_03711

Alternate gene names: 124025084

Gene position: 344357-345754 (Clockwise)

Preceding gene: 124025081

Following gene: 124025088

Centisome position: 18.47

GC content: 39.56

Gene sequence:

>1398_bases
TTGAACAAAAGAAGAAAAAGAAAATCAAGAAGAGCCACCTTGCGTAAAAGCCTTCTCGCTAGCTTGTCTTTTCATGTTTA
CTCTCGCTTCAAAAGAGCTATTAGATGGCTGTTGCCTGGATTAGTAGTCAAAAGGTGGATGATGACATCTGGATTGGGCT
TGTTAATTGCTTTGATTGGAGCCTCTATTTGGGCTGACTTGCGTCCAATTTATTGGGTAGTTGAAATACTTTTTTGGTTT
TTAGGATTCATAACTACTTTTTTACCTAGAACTATTTCTGGACCTTTAGTCTTTTTTATAGGGATATCTCTTTTGATTTG
GGGTCAAGGGAGAAGTTTTGAATCTATTAGGCAGGCTTTAGGTTCAAAAAAAGATACTTTTTTGGTTGATGCTTTAAGAG
CTAAGCAAAAATTAAATAGAGGTCCAAACATCGTTGCTATTGGAGGAGGAACAGGTTTATCTTCATTATTAAAAGGCTTA
AAAAGATATAGCAGCCGAATTACGGCAATAGTTACTGTTGCTGATGATGGAGGAAGTAGTGGAGTTCTTAGGAGAGAACT
GGGTGTTCAGCCTCCAGGAGACATAAGGAATTGTTTAGCAGCTTTAGCAACAGAAGAACCGCTTATTAAAGGACTTTTTC
AATATCGCTTTCCCTCAGGTAGTGGACTTGAGGGACATAGTTTTGGGAATCTTTTCCTATCTGCCTTGACTGCGATAACT
GGAAGCTTAGAGACCGCAATTACTGCTTCAAGTCGTGTTCTTGCAGTTCAGGGTCAAGTTGTACCAGCAACTAATGTAGA
TGTTCGTTTGTGGGCGGAACTCGAAAATGGGGACCGAATAGATGGAGAGTCAGCCATAGGGAAAGCCCCCTTGCCAATAA
TCAGAATCGGCTGTTACCCATCGCGACCCCCAGCTTTGCCAAGAGCTCTAGAAGCCATAAGAAATGCTGAAATTATTTTG
ATAGGTCCAGGAAGTTTATATACTTCAATTCTTCCAAACCTGCTTGTCCCTGAAATAGTCGAGGCGATTGAGAAGAGCAA
AGCTCCTAAACTATATGTATGTAATTTGATGACTCAACCTGGAGAAACTGATGGACTTGACGTAACTGGTCATGTAAGGG
CCATAGAAGCACAATTGGCATCAAGAGGAATTTCTAGGAAAATATTTAGTTCAATACTTGCTCAAGATGAATTAAAACCA
TCCCCATTGGTTGATTACTACAAATCAAAAGGGGCTGAACCAGTCAAATGCAACAAGATTGATCTTTTATCTAGAGGATA
TAATGTTTATTTAGCTTCTCTTCAGGGTTCAAAGGTCACTCCAACTTTGAGGCACGACCCAAGAAGTCTCGCTTTAGCAA
TAATGAGGTTTTACAGAAGATACAAAAAAGGTAAATAA

Upstream 100 bases:

>100_bases
CTCATTTTGTATGAGATCTGTGAAATGGGAAGTTTAATTAGAGTTTATATGAATTAATTATTTAGGTCTCTTTGTTGAAA
TTTTATCAAACTCGAATCCA

Downstream 100 bases:

>100_bases
ATTAGTATGCATCTTGCATTTCATAAAAATCAGGCTGAACATAGTCTTTTCTGAGAGGCCATCCTTTCCAGTCTTCAGGC
ATTAAAAGTCTTTTAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MNKRRKRKSRRATLRKSLLASLSFHVYSRFKRAIRWLLPGLVVKRWMMTSGLGLLIALIGASIWADLRPIYWVVEILFWF
LGFITTFLPRTISGPLVFFIGISLLIWGQGRSFESIRQALGSKKDTFLVDALRAKQKLNRGPNIVAIGGGTGLSSLLKGL
KRYSSRITAIVTVADDGGSSGVLRRELGVQPPGDIRNCLAALATEEPLIKGLFQYRFPSGSGLEGHSFGNLFLSALTAIT
GSLETAITASSRVLAVQGQVVPATNVDVRLWAELENGDRIDGESAIGKAPLPIIRIGCYPSRPPALPRALEAIRNAEIIL
IGPGSLYTSILPNLLVPEIVEAIEKSKAPKLYVCNLMTQPGETDGLDVTGHVRAIEAQLASRGISRKIFSSILAQDELKP
SPLVDYYKSKGAEPVKCNKIDLLSRGYNVYLASLQGSKVTPTLRHDPRSLALAIMRFYRRYKKGK

Sequences:

>Translated_465_residues
MNKRRKRKSRRATLRKSLLASLSFHVYSRFKRAIRWLLPGLVVKRWMMTSGLGLLIALIGASIWADLRPIYWVVEILFWF
LGFITTFLPRTISGPLVFFIGISLLIWGQGRSFESIRQALGSKKDTFLVDALRAKQKLNRGPNIVAIGGGTGLSSLLKGL
KRYSSRITAIVTVADDGGSSGVLRRELGVQPPGDIRNCLAALATEEPLIKGLFQYRFPSGSGLEGHSFGNLFLSALTAIT
GSLETAITASSRVLAVQGQVVPATNVDVRLWAELENGDRIDGESAIGKAPLPIIRIGCYPSRPPALPRALEAIRNAEIIL
IGPGSLYTSILPNLLVPEIVEAIEKSKAPKLYVCNLMTQPGETDGLDVTGHVRAIEAQLASRGISRKIFSSILAQDELKP
SPLVDYYKSKGAEPVKCNKIDLLSRGYNVYLASLQGSKVTPTLRHDPRSLALAIMRFYRRYKKGK
>Mature_465_residues
MNKRRKRKSRRATLRKSLLASLSFHVYSRFKRAIRWLLPGLVVKRWMMTSGLGLLIALIGASIWADLRPIYWVVEILFWF
LGFITTFLPRTISGPLVFFIGISLLIWGQGRSFESIRQALGSKKDTFLVDALRAKQKLNRGPNIVAIGGGTGLSSLLKGL
KRYSSRITAIVTVADDGGSSGVLRRELGVQPPGDIRNCLAALATEEPLIKGLFQYRFPSGSGLEGHSFGNLFLSALTAIT
GSLETAITASSRVLAVQGQVVPATNVDVRLWAELENGDRIDGESAIGKAPLPIIRIGCYPSRPPALPRALEAIRNAEIIL
IGPGSLYTSILPNLLVPEIVEAIEKSKAPKLYVCNLMTQPGETDGLDVTGHVRAIEAQLASRGISRKIFSSILAQDELKP
SPLVDYYKSKGAEPVKCNKIDLLSRGYNVYLASLQGSKVTPTLRHDPRSLALAIMRFYRRYKKGK

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=213, Percent_Identity=40.3755868544601, Blast_Score=139, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 50991; Mature: 50991

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRRKRKSRRATLRKSLLASLSFHVYSRFKRAIRWLLPGLVVKRWMMTSGLGLLIALIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ASIWADLRPIYWVVEILFWFLGFITTFLPRTISGPLVFFIGISLLIWGQGRSFESIRQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCHHHHHHHH
GSKKDTFLVDALRAKQKLNRGPNIVAIGGGTGLSSLLKGLKRYSSRITAIVTVADDGGSS
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCCCC
GVLRRELGVQPPGDIRNCLAALATEEPLIKGLFQYRFPSGSGLEGHSFGNLFLSALTAIT
CCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
GSLETAITASSRVLAVQGQVVPATNVDVRLWAELENGDRIDGESAIGKAPLPIIRIGCYP
CCHHHHHCCCCEEEEEECEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC
SRPPALPRALEAIRNAEIILIGPGSLYTSILPNLLVPEIVEAIEKSKAPKLYVCNLMTQP
CCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
GETDGLDVTGHVRAIEAQLASRGISRKIFSSILAQDELKPSPLVDYYKSKGAEPVKCNKI
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCH
DLLSRGYNVYLASLQGSKVTPTLRHDPRSLALAIMRFYRRYKKGK
HHHHCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRRKRKSRRATLRKSLLASLSFHVYSRFKRAIRWLLPGLVVKRWMMTSGLGLLIALIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ASIWADLRPIYWVVEILFWFLGFITTFLPRTISGPLVFFIGISLLIWGQGRSFESIRQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCHHHHHHHH
GSKKDTFLVDALRAKQKLNRGPNIVAIGGGTGLSSLLKGLKRYSSRITAIVTVADDGGSS
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCCCC
GVLRRELGVQPPGDIRNCLAALATEEPLIKGLFQYRFPSGSGLEGHSFGNLFLSALTAIT
CCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
GSLETAITASSRVLAVQGQVVPATNVDVRLWAELENGDRIDGESAIGKAPLPIIRIGCYP
CCHHHHHCCCCEEEEEECEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC
SRPPALPRALEAIRNAEIILIGPGSLYTSILPNLLVPEIVEAIEKSKAPKLYVCNLMTQP
CCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
GETDGLDVTGHVRAIEAQLASRGISRKIFSSILAQDELKPSPLVDYYKSKGAEPVKCNKI
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCH
DLLSRGYNVYLASLQGSKVTPTLRHDPRSLALAIMRFYRRYKKGK
HHHHCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]