| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is sfsA [H]
Identifier: 124025053
GI number: 124025053
Start: 314366
End: 315127
Strand: Direct
Name: sfsA [H]
Synonym: NATL1_03401
Alternate gene names: 124025053
Gene position: 314366-315127 (Clockwise)
Preceding gene: 124025051
Following gene: 124025054
Centisome position: 16.86
GC content: 36.61
Gene sequence:
>762_bases GTGATTGAAATTGGTAAAACCATTATTAAGTTTCCGCCTCTTATAGAGGGAATATTAATTAAGAGATATAAAAGGTTTTT GGCCGATATTGAGTTGGATGATGGAGAGGTTGTTACAGCTCATTGTGCAAATACAGGACCAATGAAAGGGGTTTTGTGGC CTGGGGGGAGAGTCAGACTTAAGTATTCTCCTTCGCCTAAACGTAAATTAGATTGGTCTTGGGAGCAAGCTGAGGTGCCT AGTCATAATGAGAAGAAGAAATGCTGGGTTGGTATTAATACATCTTTGCCTAATAAATTGATTAAACATCTAATTGAAGC AAATTGTTTAGAGAGGCAATTTGGTCAAATTTCAAGCATTAAGCCTGAGGTTGTTTACGGTTTAGAAAGAAAAAGTAGAA TTGATTTATTGCTTTATCCAAGCATTCAGAATGAAGATAGTAGAAAAATATTTGTCGAGGTTAAAAATACAACCTGGTGT GATGATTCTTTAGCATTGTTCCCAGATACAGTAACGACTAGAGGTCAAAAACATTTAAAAGAATTAATGAGTGTTTATCC AGACTCTCGGGCAGTGCTAATTCCTTGTATTAGTAGAAGCGATATGGAACTTTTTTCACCTGGTGAAATAGCAGATCCTG AGTATGGGAGATTGTTTAGAGAGGCATTAACTAAGGGTGTTGAAGTGATTCCATGCGCATTTGGTTTCTTTATAGATCAC ATCACTTGGGAAGGTACTAGACCATTAAAGAGTTCGAGATAA
Upstream 100 bases:
>100_bases GCAATTTCTTTGATTGATTTCGACATGTTAAATTTGAAAAAAGAGAGCTTTCATTTTCTAAAATATTTTGTAGTTCTTGT TTTAATTGGATGTTAATTAA
Downstream 100 bases:
>100_bases AAATAAACTATTTCAACATCAATCACAGGCATATATAGTTTAGCTATTTTAACTAGTTCTTGTTTTTTGGTTTGACTGCT TCAGTTCTGTATAGGATTTG
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRLKYSPSPKRKLDWSWEQAEVP SHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSIKPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWC DDSLALFPDTVTTRGQKHLKELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH ITWEGTRPLKSSR
Sequences:
>Translated_253_residues MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRLKYSPSPKRKLDWSWEQAEVP SHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSIKPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWC DDSLALFPDTVTTRGQKHLKELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH ITWEGTRPLKSSR >Mature_253_residues MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRLKYSPSPKRKLDWSWEQAEVP SHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSIKPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWC DDSLALFPDTVTTRGQKHLKELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH ITWEGTRPLKSSR
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=221, Percent_Identity=41.6289592760181, Blast_Score=148, Evalue=4e-37,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 28872; Mature: 28872
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRL CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCEEEE KYSPSPKRKLDWSWEQAEVPSHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSI EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC KPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWCDDSLALFPDTVTTRGQKHLK CCHHEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCEECCCCCEECCCHHHCCCHHHHH ELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH HHHHHCCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHH ITWEGTRPLKSSR EECCCCCCCCCCC >Mature Secondary Structure MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRL CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCEEEE KYSPSPKRKLDWSWEQAEVPSHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSI EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC KPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWCDDSLALFPDTVTTRGQKHLK CCHHEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCEECCCCCEECCCHHHCCCHHHHH ELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH HHHHHCCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHH ITWEGTRPLKSSR EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA