| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025045
Identifier: 124025045
GI number: 124025045
Start: 305207
End: 307141
Strand: Direct
Name: 124025045
Synonym: NATL1_03321
Alternate gene names: NA
Gene position: 305207-307141 (Clockwise)
Preceding gene: 124025044
Following gene: 124025050
Centisome position: 16.37
GC content: 27.6
Gene sequence:
>1935_bases TTGTCTTTATTTGAGACCTCTATAGGAAAGGAGCATTTTCTCGGAAAATCAGTTATTGATAAACACTATAATTTTTCTGT TGGTAATTTAGAAGAAAATGATAAAATATTATCCTCAAGAAAATTACAACAGAATGAAGTTACATCTTTAACTCTTAAAA TATTTGCTGATAAGCAATATGATTATGATCAAAATATTTATCTAGCAGAGGGGAATGTCAAGGCTCTAATAAATGGTGGA ATCTTAAGATCTGACTTATTAAGTTATGATAAATCAACCGGGATCTTGATCGCTGAGGGTAATATTAGATTCAGAAAAGG AGGGCAATATTTTAGAGCTAAAGAATTCAAGTTTGATTTATTAAAGAAAGAAGGTAGTATTAAAGATGCCTATGGGATAT TAGATTTAAAAAATGTATTAAATGATTTGAAAATTGATGCTATTTCAAATCAGGCTAAAGCTCTACATAGCACTAATGAT AAAGAAATAAATACTTACGATGATGGAATAGAATTTTCTTTTGGAAATATTAAATTACCAGATAATAAAATCACAAGATC TAATAAATCTATTGGTTTAATTAATAACTGGAGATTTAAATCTAATTCAATAAGTATTGAGGAACATGGATGGAAATCTA ACAGGATTGTTTTTACTAATGATCCATTAGATCCTAATCAAATTTCTTTTGAGGGTATAGATGTTATCGCAGAAGAAGAA GAAGATGGTAGATTACTTATTACTAGTTCTAAAACTAATTTAATTCTTGAGAACAGATCAAAAATTTTTATAGGAAAAAG AATATTTGGACAAAAAAAGAAAAAGAGAAGTAAATTTCAATTGATATTAGATGGTAAAGATCGTGACGGATTAGTCTTAG TAAGAAGAAGTAATTCTACGAATATTGCTGATAATATAAAACTTGAACTTCAACCTCAATTTTTAATTAGTAGAGCTATT TTAGGTAAAACTAATAGTTATAAAAATAACAAAGATAAAAATATTAACTTTTCTGATTTATTTGGTTTAAATATAAATCT GAATGCAAGTAATCCCAATTGGAGTTTTGATAGTTTAAATGATTTAAGTACATTAAATACCTCCAGATTATTTAATGGAT TAAGGCATTCAAGCTCTTTTAGTATACCTATTTTAGAAGAATCAACTTTCAATATTTTTACTGCTTATAGATCGAGAGCT TGGAATGGAACAATTGGTGAGACTGAGATTAAATCTGCATTTGGAGGCTTTATCGAAAAGTCGCAGCATTTTACGACTGG CAGTTTAAAAAATAACTTAAATATTAGGATAGGAACAGGTAGATATGAAACAGAAAAATTTGAAAATAGTGAAATGATTA GCCATTGGCGCTCTAGTATCTTTTCTTCTTTAGATAGTGAATATCAAATATGGAAAAGTAATAAAAAAAATCTTTATCAA AATCATTTAACGCCTTTATCCCCTGTTTTACTTAACTCTGAATTAGTCTTAAGAACTAATATTGATTCAGCTTATTTCAA CTATTTGAATGATAGTGATCAAGGCTTTCTCAAGCTTAGTATTGGTCCCGAAATTAGACTAGGTAATTTAGAGAGAGATT ATTTTGATTATACAAAACTTTCGGTTATGCCAGGCGTGAAACTTAAATTTGGCAATAGTCCATTTAAGTTTGATAAAGCA ATAGATTTGAAAACTATAAATATAAGTTTAATACAACAAATATATGGACCTTTAATGTTTGATGTTATTTCTAATTTAAA TATTGATACTACCTCCAAAAACTATGGAGAATATTATGATACAAAGTTAGGGATCTTATGGCATAAAAGAGCATACGAAT GTGGGATTTACTATCATCCTAATAATGATGCTGGAGGATTATATTTTCGTATAAATGGATTTAAATTTGGTAATTCTACT AAAGCAGTATTTTAG
Upstream 100 bases:
>100_bases CTTTATTAGGTAATATCTTTTCGTCGGCTTAACTCATTTGGCGGCGAAGAAAAAATATTCATTGGCTTTAAACCTAGGAC TTCTGGGGTTTGGCCTATTA
Downstream 100 bases:
>100_bases ATTTTTTGTTTGAAATTATTGAGATAAGGTAAGTTATTAAATGTTTTATTTATTTTTTCTTCTTCATCTAGTAGTTGAGA GGTAGCATCCCATTTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MSLFETSIGKEHFLGKSVIDKHYNFSVGNLEENDKILSSRKLQQNEVTSLTLKIFADKQYDYDQNIYLAEGNVKALINGG ILRSDLLSYDKSTGILIAEGNIRFRKGGQYFRAKEFKFDLLKKEGSIKDAYGILDLKNVLNDLKIDAISNQAKALHSTND KEINTYDDGIEFSFGNIKLPDNKITRSNKSIGLINNWRFKSNSISIEEHGWKSNRIVFTNDPLDPNQISFEGIDVIAEEE EDGRLLITSSKTNLILENRSKIFIGKRIFGQKKKKRSKFQLILDGKDRDGLVLVRRSNSTNIADNIKLELQPQFLISRAI LGKTNSYKNNKDKNINFSDLFGLNINLNASNPNWSFDSLNDLSTLNTSRLFNGLRHSSSFSIPILEESTFNIFTAYRSRA WNGTIGETEIKSAFGGFIEKSQHFTTGSLKNNLNIRIGTGRYETEKFENSEMISHWRSSIFSSLDSEYQIWKSNKKNLYQ NHLTPLSPVLLNSELVLRTNIDSAYFNYLNDSDQGFLKLSIGPEIRLGNLERDYFDYTKLSVMPGVKLKFGNSPFKFDKA IDLKTINISLIQQIYGPLMFDVISNLNIDTTSKNYGEYYDTKLGILWHKRAYECGIYYHPNNDAGGLYFRINGFKFGNST KAVF
Sequences:
>Translated_644_residues MSLFETSIGKEHFLGKSVIDKHYNFSVGNLEENDKILSSRKLQQNEVTSLTLKIFADKQYDYDQNIYLAEGNVKALINGG ILRSDLLSYDKSTGILIAEGNIRFRKGGQYFRAKEFKFDLLKKEGSIKDAYGILDLKNVLNDLKIDAISNQAKALHSTND KEINTYDDGIEFSFGNIKLPDNKITRSNKSIGLINNWRFKSNSISIEEHGWKSNRIVFTNDPLDPNQISFEGIDVIAEEE EDGRLLITSSKTNLILENRSKIFIGKRIFGQKKKKRSKFQLILDGKDRDGLVLVRRSNSTNIADNIKLELQPQFLISRAI LGKTNSYKNNKDKNINFSDLFGLNINLNASNPNWSFDSLNDLSTLNTSRLFNGLRHSSSFSIPILEESTFNIFTAYRSRA WNGTIGETEIKSAFGGFIEKSQHFTTGSLKNNLNIRIGTGRYETEKFENSEMISHWRSSIFSSLDSEYQIWKSNKKNLYQ NHLTPLSPVLLNSELVLRTNIDSAYFNYLNDSDQGFLKLSIGPEIRLGNLERDYFDYTKLSVMPGVKLKFGNSPFKFDKA IDLKTINISLIQQIYGPLMFDVISNLNIDTTSKNYGEYYDTKLGILWHKRAYECGIYYHPNNDAGGLYFRINGFKFGNST KAVF >Mature_643_residues SLFETSIGKEHFLGKSVIDKHYNFSVGNLEENDKILSSRKLQQNEVTSLTLKIFADKQYDYDQNIYLAEGNVKALINGGI LRSDLLSYDKSTGILIAEGNIRFRKGGQYFRAKEFKFDLLKKEGSIKDAYGILDLKNVLNDLKIDAISNQAKALHSTNDK EINTYDDGIEFSFGNIKLPDNKITRSNKSIGLINNWRFKSNSISIEEHGWKSNRIVFTNDPLDPNQISFEGIDVIAEEEE DGRLLITSSKTNLILENRSKIFIGKRIFGQKKKKRSKFQLILDGKDRDGLVLVRRSNSTNIADNIKLELQPQFLISRAIL GKTNSYKNNKDKNINFSDLFGLNINLNASNPNWSFDSLNDLSTLNTSRLFNGLRHSSSFSIPILEESTFNIFTAYRSRAW NGTIGETEIKSAFGGFIEKSQHFTTGSLKNNLNIRIGTGRYETEKFENSEMISHWRSSIFSSLDSEYQIWKSNKKNLYQN HLTPLSPVLLNSELVLRTNIDSAYFNYLNDSDQGFLKLSIGPEIRLGNLERDYFDYTKLSVMPGVKLKFGNSPFKFDKAI DLKTINISLIQQIYGPLMFDVISNLNIDTTSKNYGEYYDTKLGILWHKRAYECGIYYHPNNDAGGLYFRINGFKFGNSTK AVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73496; Mature: 73365
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFETSIGKEHFLGKSVIDKHYNFSVGNLEENDKILSSRKLQQNEVTSLTLKIFADKQY CCCCCCCCCHHHHCCHHHHHHCCCCEECCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCC DYDQNIYLAEGNVKALINGGILRSDLLSYDKSTGILIAEGNIRFRKGGQYFRAKEFKFDL CCCCCEEEECCCEEEEEECCCHHHHHHHCCCCCCEEEECCCEEEECCCCEEEEECCCCEE LKKEGSIKDAYGILDLKNVLNDLKIDAISNQAKALHSTNDKEINTYDDGIEFSFGNIKLP HHCCCCCCHHHHHHHHHHHHHHCEEEECCCHHHHHHCCCCCCCCCCCCCEEEEECCEECC DNKITRSNKSIGLINNWRFKSNSISIEEHGWKSNRIVFTNDPLDPNQISFEGIDVIAEEE CCCCCCCCCCEEEEECCEECCCCEEEHHCCCCCCEEEEECCCCCCCEEEECCEEEEEECC EDGRLLITSSKTNLILENRSKIFIGKRIFGQKKKKRSKFQLILDGKDRDGLVLVRRSNST CCCEEEEEECCCEEEEECCCEEEEEHHHHCCHHHCCCEEEEEECCCCCCCEEEEEECCCC NIADNIKLELQPQFLISRAILGKTNSYKNNKDKNINFSDLFGLNINLNASNPNWSFDSLN CCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCC DLSTLNTSRLFNGLRHSSSFSIPILEESTFNIFTAYRSRAWNGTIGETEIKSAFGGFIEK CHHHCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHHHHC SQHFTTGSLKNNLNIRIGTGRYETEKFENSEMISHWRSSIFSSLDSEYQIWKSNKKNLYQ CCCEEECCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH NHLTPLSPVLLNSELVLRTNIDSAYFNYLNDSDQGFLKLSIGPEIRLGNLERDYFDYTKL HCCCCCCHHHCCCCEEEEECCCHHHHHHCCCCCCCEEEEEECCCEEECCCCCCHHCCEEE SVMPGVKLKFGNSPFKFDKAIDLKTINISLIQQIYGPLMFDVISNLNIDTTSKNYGEYYD EECCCEEEEECCCCCEECCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHC TKLGILWHKRAYECGIYYHPNNDAGGLYFRINGFKFGNSTKAVF CEEEEEEECCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCC >Mature Secondary Structure SLFETSIGKEHFLGKSVIDKHYNFSVGNLEENDKILSSRKLQQNEVTSLTLKIFADKQY CCCCCCCCHHHHCCHHHHHHCCCCEECCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCC DYDQNIYLAEGNVKALINGGILRSDLLSYDKSTGILIAEGNIRFRKGGQYFRAKEFKFDL CCCCCEEEECCCEEEEEECCCHHHHHHHCCCCCCEEEECCCEEEECCCCEEEEECCCCEE LKKEGSIKDAYGILDLKNVLNDLKIDAISNQAKALHSTNDKEINTYDDGIEFSFGNIKLP HHCCCCCCHHHHHHHHHHHHHHCEEEECCCHHHHHHCCCCCCCCCCCCCEEEEECCEECC DNKITRSNKSIGLINNWRFKSNSISIEEHGWKSNRIVFTNDPLDPNQISFEGIDVIAEEE CCCCCCCCCCEEEEECCEECCCCEEEHHCCCCCCEEEEECCCCCCCEEEECCEEEEEECC EDGRLLITSSKTNLILENRSKIFIGKRIFGQKKKKRSKFQLILDGKDRDGLVLVRRSNST CCCEEEEEECCCEEEEECCCEEEEEHHHHCCHHHCCCEEEEEECCCCCCCEEEEEECCCC NIADNIKLELQPQFLISRAILGKTNSYKNNKDKNINFSDLFGLNINLNASNPNWSFDSLN CCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCC DLSTLNTSRLFNGLRHSSSFSIPILEESTFNIFTAYRSRAWNGTIGETEIKSAFGGFIEK CHHHCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHHHHC SQHFTTGSLKNNLNIRIGTGRYETEKFENSEMISHWRSSIFSSLDSEYQIWKSNKKNLYQ CCCEEECCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH NHLTPLSPVLLNSELVLRTNIDSAYFNYLNDSDQGFLKLSIGPEIRLGNLERDYFDYTKL HCCCCCCHHHCCCCEEEEECCCHHHHHHCCCCCCCEEEEEECCCEEECCCCCCHHCCEEE SVMPGVKLKFGNSPFKFDKAIDLKTINISLIQQIYGPLMFDVISNLNIDTTSKNYGEYYD EECCCEEEEECCCCCEECCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHC TKLGILWHKRAYECGIYYHPNNDAGGLYFRINGFKFGNSTKAVF CEEEEEEECCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA