| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is aroC
Identifier: 124025017
GI number: 124025017
Start: 281855
End: 282940
Strand: Direct
Name: aroC
Synonym: NATL1_03041
Alternate gene names: 124025017
Gene position: 281855-282940 (Clockwise)
Preceding gene: 124025016
Following gene: 124025022
Centisome position: 15.12
GC content: 40.24
Gene sequence:
>1086_bases ATGGGAAGTAGTTTCGGGAAACTTTTTACTATCAGCACCTTTGGCGAATCTCACGGAGGAGGTGTTGGTGTAATTATTGA TGGATGTCCTCCAAGGTTGGAGCTCGACATTAACGAAATACAAAATGATCTCAATCGAAGGAGGCCAGGACAAAGCAAAA TAACTACTCCAAGAAACGAAAGTGATGAAGTTGAAATTCTTAGTGGTCTTTTAGGTAATAAAACCTTAGGAACACCAATT GCCATGGTTGTAAGAAATAAAGATCATCGGCCTAAGGATTATTCTGAAATTAAAAAAACTTTTAGGCCATCTCATGCTGA TGCTACATATCAGAAAAAATACGGAATTCAGGCTTCAAGTGGCGGCGGGCGTGCATCAGCAAGAGAAACTATAGGTAGAG TTGCTGCGGGTTCTGTTGCAAAGCAACTTCTAACTAAGTTTGCTAAAACGGAAATACTCGCTTGGGTAAAGAGAATTCAT GATATTGAGGCTGAGATTCATCCGAGTGAAGTTACTTTTGATGAGATTGAGAAAAATATTGTTCGATGTCCAAATCAGTC AGCTGCTGATTTAATGATTCAGAGAGTGGAGGCTTTTGGTAAAGAAGGAGACTCCTGTGGTGGAGTCATAGAATGTGTTG TTCGGAATCCGCCCATAGGACTTGGTATGCCTGTTTTTGATAAATTAGAAGCTGATTTAGCAAAGGCATTAATGTCTTTG CCTGCCACTAAAGGTTTTGAGGTGGGATCTGGTTTCGGAGGTACTTATTTGAAAGGCAGCGAACATAATGATCCTTTTTT GCCATCCGATTCCAATCAATTGAAAACTGCCACTAACAATTCAGGCGGAATTCAAGGAGGTATCAGTAATGGTGAGGATA TAGTACTAAGAGTAGGTTTTAAACCAACAGCAACTATTAGGAAAAGTCAAAAGACAATTGATGAGGATGGTAATGCAATA ACTCTCAAGGCGACAGGAAGACATGATCCTTGTGTTTTGCCAAGGGCAGTTCCAATGGTTGAAGCAATGGTTGCGCTAGT TTTAGCTGATCATTTACTAAGGCAAAGAGGCCAATGTACTGACTAA
Upstream 100 bases:
>100_bases TTTAGAGGGCTTTTTTTTTGACTTTTTTTTGTTCTATGCATTACTTGAGTGGTTTATTTTTTAGCAAGTATTGATTAACA TTTTGTAGATAGGTTTATTT
Downstream 100 bases:
>100_bases TGTTCAAATAAATAATTATTTAAGATGCAATGCTAGACAAGGAATATATTGTTGATTTTTAGAATAGATTATCAGTAATC CTCTAGCCATATTTCTAGGT
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MGSSFGKLFTISTFGESHGGGVGVIIDGCPPRLELDINEIQNDLNRRRPGQSKITTPRNESDEVEILSGLLGNKTLGTPI AMVVRNKDHRPKDYSEIKKTFRPSHADATYQKKYGIQASSGGGRASARETIGRVAAGSVAKQLLTKFAKTEILAWVKRIH DIEAEIHPSEVTFDEIEKNIVRCPNQSAADLMIQRVEAFGKEGDSCGGVIECVVRNPPIGLGMPVFDKLEADLAKALMSL PATKGFEVGSGFGGTYLKGSEHNDPFLPSDSNQLKTATNNSGGIQGGISNGEDIVLRVGFKPTATIRKSQKTIDEDGNAI TLKATGRHDPCVLPRAVPMVEAMVALVLADHLLRQRGQCTD
Sequences:
>Translated_361_residues MGSSFGKLFTISTFGESHGGGVGVIIDGCPPRLELDINEIQNDLNRRRPGQSKITTPRNESDEVEILSGLLGNKTLGTPI AMVVRNKDHRPKDYSEIKKTFRPSHADATYQKKYGIQASSGGGRASARETIGRVAAGSVAKQLLTKFAKTEILAWVKRIH DIEAEIHPSEVTFDEIEKNIVRCPNQSAADLMIQRVEAFGKEGDSCGGVIECVVRNPPIGLGMPVFDKLEADLAKALMSL PATKGFEVGSGFGGTYLKGSEHNDPFLPSDSNQLKTATNNSGGIQGGISNGEDIVLRVGFKPTATIRKSQKTIDEDGNAI TLKATGRHDPCVLPRAVPMVEAMVALVLADHLLRQRGQCTD >Mature_360_residues GSSFGKLFTISTFGESHGGGVGVIIDGCPPRLELDINEIQNDLNRRRPGQSKITTPRNESDEVEILSGLLGNKTLGTPIA MVVRNKDHRPKDYSEIKKTFRPSHADATYQKKYGIQASSGGGRASARETIGRVAAGSVAKQLLTKFAKTEILAWVKRIHD IEAEIHPSEVTFDEIEKNIVRCPNQSAADLMIQRVEAFGKEGDSCGGVIECVVRNPPIGLGMPVFDKLEADLAKALMSLP ATKGFEVGSGFGGTYLKGSEHNDPFLPSDSNQLKTATNNSGGIQGGISNGEDIVLRVGFKPTATIRKSQKTIDEDGNAIT LKATGRHDPCVLPRAVPMVEAMVALVLADHLLRQRGQCTD
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=360, Percent_Identity=46.3888888888889, Blast_Score=303, Evalue=2e-83, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=55.3133514986376, Blast_Score=403, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_PROM1 (A2C058)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014133.1 - ProteinModelPortal: A2C058 - SMR: A2C058 - STRING: A2C058 - GeneID: 4780216 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_03041 - eggNOG: COG0082 - HOGENOM: HBG292336 - OMA: TATIGKE - ProtClustDB: PRK05382 - BioCyc: PMAR167555:NATL1_03041-MONOMER - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 38831; Mature: 38699
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSFGKLFTISTFGESHGGGVGVIIDGCPPRLELDINEIQNDLNRRRPGQSKITTPRNE CCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCC SDEVEILSGLLGNKTLGTPIAMVVRNKDHRPKDYSEIKKTFRPSHADATYQKKYGIQASS CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCEECC GGGRASARETIGRVAAGSVAKQLLTKFAKTEILAWVKRIHDIEAEIHPSEVTFDEIEKNI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VRCPNQSAADLMIQRVEAFGKEGDSCGGVIECVVRNPPIGLGMPVFDKLEADLAKALMSL HCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC PATKGFEVGSGFGGTYLKGSEHNDPFLPSDSNQLKTATNNSGGIQGGISNGEDIVLRVGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECC KPTATIRKSQKTIDEDGNAITLKATGRHDPCVLPRAVPMVEAMVALVLADHLLRQRGQCT CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC D C >Mature Secondary Structure GSSFGKLFTISTFGESHGGGVGVIIDGCPPRLELDINEIQNDLNRRRPGQSKITTPRNE CCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCC SDEVEILSGLLGNKTLGTPIAMVVRNKDHRPKDYSEIKKTFRPSHADATYQKKYGIQASS CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCEECC GGGRASARETIGRVAAGSVAKQLLTKFAKTEILAWVKRIHDIEAEIHPSEVTFDEIEKNI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VRCPNQSAADLMIQRVEAFGKEGDSCGGVIECVVRNPPIGLGMPVFDKLEADLAKALMSL HCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC PATKGFEVGSGFGGTYLKGSEHNDPFLPSDSNQLKTATNNSGGIQGGISNGEDIVLRVGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECC KPTATIRKSQKTIDEDGNAITLKATGRHDPCVLPRAVPMVEAMVALVLADHLLRQRGQCT CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA