BacMap

Definition	Prochlorococcus marinus str. NATL1A, complete genome.
Accession	NC_008819
Length	1,864,731

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The map label for this gene is cbiO [H]

Identifier: 124024912

GI number: 124024912

Start: 184279

End: 184965

Strand: Direct

Name: cbiO [H]

Synonym: NATL1_01991

Alternate gene names: 124024912

Gene position: 184279-184965 (Clockwise)

Preceding gene: 124024911

Following gene: 124024913

Centisome position: 9.88

GC content: 37.99

Gene sequence:

>687_bases
TTGGAACCAACCACTTGGTCTGGCTATTTGGAATTTGATCAAGTCTCTTTTTCTTGGCCTAATGGAGTCAATGTTATTAA
TCAATGCTCCTTTTCAATTGTAAAACCTGGTTTGTGGATGCTTGTTGGTGAAAACGGAAGTGGTAAAAGCACCTTGTTTC
GCTTGATAAATGGAGGAATACGTCCTAAAAGCGGAAAAATTTTCTGCTCTCTTAGACCATCAATGGTTTATCAAAATCCA
GACCATCAATTGCTTATGCCAACATGTAAAAGCGAGTTGATGCTTAGTGTTCCTAAAACCATTCCCCAGACCAATCTATT
GGACTTAATTCATTCAGCTCTTGAAAAAGTGGACTTGGGTGAAATGTTGGACAGGCCTATTCATACTTTAAGTGGTGGCC
AAAAGCAGCGTTTAGCCCTTGCTGGAGCAATTGTTAGCAATTCAAATTTACTTTTACTTGATGAGCCCACAGCTCTATTG
GACCCTCAAAGTCAAAATTCAGTTTTAAAAGTTATGAAAAAATTGACAAGTTCCTCTGCTGATCCAATTACAGCAATATG
GGTTACTCATCGATTGGAAGAATTATATTTTTGTGATGGAGCGGCAATTGTTAAAAATGGAGCTATCAGCAATTGGAATT
CTGGTTCAAAAGTGTTCCAAGAATTAAAATCACTTGCCCTTAGGTAG

Upstream 100 bases:

>100_bases
AAATTACAGCTGTACAGATTTATGAAAAGACTAGTAGCAGCACTAGCAAAAGACCTGGATTTTCACTCCAGAATTAAGAA
AAAATAGGAGTCATTCAATT

Downstream 100 bases:

>100_bases
CTGGCAAGGGTAAGTTCTTAATGTTGTAATCCTCGGTAGCTCAGCGGTAGAGCGATCGGCTGTTAACCGATTGGTCGCAG
GTTCGAATCCCGCCCGGGGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MEPTTWSGYLEFDQVSFSWPNGVNVINQCSFSIVKPGLWMLVGENGSGKSTLFRLINGGIRPKSGKIFCSLRPSMVYQNP
DHQLLMPTCKSELMLSVPKTIPQTNLLDLIHSALEKVDLGEMLDRPIHTLSGGQKQRLALAGAIVSNSNLLLLDEPTALL
DPQSQNSVLKVMKKLTSSSADPITAIWVTHRLEELYFCDGAAIVKNGAISNWNSGSKVFQELKSLALR

Sequences:

>Translated_228_residues
MEPTTWSGYLEFDQVSFSWPNGVNVINQCSFSIVKPGLWMLVGENGSGKSTLFRLINGGIRPKSGKIFCSLRPSMVYQNP
DHQLLMPTCKSELMLSVPKTIPQTNLLDLIHSALEKVDLGEMLDRPIHTLSGGQKQRLALAGAIVSNSNLLLLDEPTALL
DPQSQNSVLKVMKKLTSSSADPITAIWVTHRLEELYFCDGAAIVKNGAISNWNSGSKVFQELKSLALR
>Mature_228_residues
MEPTTWSGYLEFDQVSFSWPNGVNVINQCSFSIVKPGLWMLVGENGSGKSTLFRLINGGIRPKSGKIFCSLRPSMVYQNP
DHQLLMPTCKSELMLSVPKTIPQTNLLDLIHSALEKVDLGEMLDRPIHTLSGGQKQRLALAGAIVSNSNLLLLDEPTALL
DPQSQNSVLKVMKKLTSSSADPITAIWVTHRLEELYFCDGAAIVKNGAISNWNSGSKVFQELKSLALR

Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=223, Percent_Identity=27.3542600896861, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI30795238, Length=223, Percent_Identity=27.3542600896861, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI42490749, Length=228, Percent_Identity=27.1929824561404, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI42741659, Length=244, Percent_Identity=28.2786885245902, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27262624, Length=206, Percent_Identity=28.6407766990291, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27262626, Length=206, Percent_Identity=28.6407766990291, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI73747915, Length=233, Percent_Identity=27.0386266094421, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI27477115, Length=206, Percent_Identity=28.1553398058252, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI21536378, Length=227, Percent_Identity=28.1938325991189, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI73747917, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI31657092, Length=200, Percent_Identity=28, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI110832837, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI110832839, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI110832835, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI148612853, Length=215, Percent_Identity=26.9767441860465, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4506341, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI90421313, Length=213, Percent_Identity=30.5164319248826, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI105990541, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI150417984, Length=192, Percent_Identity=28.6458333333333, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI6005701, Length=206, Percent_Identity=27.6699029126214, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI45446740, Length=198, Percent_Identity=26.7676767676768, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI47078218, Length=198, Percent_Identity=26.7676767676768, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI27436953, Length=187, Percent_Identity=26.7379679144385, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=32.7272727272727, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=28.3783783783784, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=29.0748898678414, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787370, Length=223, Percent_Identity=30.0448430493274, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789873, Length=204, Percent_Identity=30.3921568627451, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=28.3261802575107, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=29.9107142857143, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787758, Length=206, Percent_Identity=29.6116504854369, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=28.9719626168224, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788210, Length=218, Percent_Identity=25.6880733944954, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787143, Length=223, Percent_Identity=26.0089686098655, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=28.9855072463768, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787547, Length=229, Percent_Identity=25.764192139738, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788506, Length=256, Percent_Identity=26.953125, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788540, Length=209, Percent_Identity=27.7511961722488, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI87082267, Length=216, Percent_Identity=26.3888888888889, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786654, Length=225, Percent_Identity=28.8888888888889, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790739, Length=204, Percent_Identity=26.9607843137255, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789672, Length=226, Percent_Identity=27.8761061946903, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=173, Percent_Identity=31.2138728323699, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786563, Length=171, Percent_Identity=30.4093567251462, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI48995001, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=29.8165137614679, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789032, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788450, Length=225, Percent_Identity=28, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786703, Length=198, Percent_Identity=30.3030303030303, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786253, Length=190, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI48994883, Length=238, Percent_Identity=28.1512605042017, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787112, Length=216, Percent_Identity=26.3888888888889, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789962, Length=225, Percent_Identity=25.7777777777778, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787182, Length=171, Percent_Identity=28.0701754385965, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=27.6381909547739, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787792, Length=213, Percent_Identity=24.4131455399061, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=23.6607142857143, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=30.9178743961353, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=27.8947368421053, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787759, Length=234, Percent_Identity=26.0683760683761, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1790525, Length=201, Percent_Identity=26.865671641791, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787113, Length=223, Percent_Identity=30.4932735426009, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI48994943, Length=196, Percent_Identity=25, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=225, Percent_Identity=31.1111111111111, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI25146777, Length=231, Percent_Identity=29.004329004329, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17565938, Length=244, Percent_Identity=25.8196721311475, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI193208177, Length=230, Percent_Identity=29.5652173913043, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17541710, Length=245, Percent_Identity=30.6122448979592, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17567265, Length=231, Percent_Identity=30.3030303030303, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=220, Percent_Identity=27.7272727272727, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=220, Percent_Identity=27.7272727272727, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=228, Percent_Identity=30.2631578947368, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=220, Percent_Identity=27.7272727272727, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17569081, Length=222, Percent_Identity=27.4774774774775, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115535101, Length=238, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=210, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=205, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71992285, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=228, Percent_Identity=26.7543859649123, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=232, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992066, Length=247, Percent_Identity=25.5060728744939, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146765, Length=247, Percent_Identity=25.5060728744939, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI86564969, Length=247, Percent_Identity=25.5060728744939, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71992070, Length=247, Percent_Identity=25.5060728744939, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=233, Percent_Identity=28.3261802575107, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71996550, Length=223, Percent_Identity=26.9058295964126, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17532409, Length=200, Percent_Identity=27.5, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=221, Percent_Identity=28.5067873303167, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=196, Percent_Identity=23.469387755102, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=237, Percent_Identity=27.4261603375527, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=208, Percent_Identity=27.8846153846154, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320296, Length=187, Percent_Identity=25.1336898395722, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=247, Percent_Identity=25.1012145748988, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221500365, Length=195, Percent_Identity=27.1794871794872, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=195, Percent_Identity=27.1794871794872, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574150, Length=185, Percent_Identity=30.8108108108108, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI116007328, Length=185, Percent_Identity=30.8108108108108, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI17136662, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24643674, Length=195, Percent_Identity=24.6153846153846, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI19920532, Length=176, Percent_Identity=31.25, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24580930, Length=176, Percent_Identity=31.25, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015856
- InterPro:   IPR003593
- InterPro:   IPR022112 [H]

Pfam domain/function: PF00005 ABC_tran; PF12370 CoABC_C [H]

EC number: NA

Molecular weight: Translated: 25054; Mature: 25054

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPTTWSGYLEFDQVSFSWPNGVNVINQCSFSIVKPGLWMLVGENGSGKSTLFRLINGGI
CCCCCCCCEEEECCEEECCCCCCCHHHHCCHHEECCCEEEEEECCCCCHHHHHHHHHCCC
RPKSGKIFCSLRPSMVYQNPDHQLLMPTCKSELMLSVPKTIPQTNLLDLIHSALEKVDLG
CCCCCEEEEEECCCEEEECCCCCEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHH
EMLDRPIHTLSGGQKQRLALAGAIVSNSNLLLLDEPTALLDPQSQNSVLKVMKKLTSSSA
HHHHHHHHHHCCCCHHHHEEEEEEECCCCEEEEECCHHHCCCCCCHHHHHHHHHHHCCCC
DPITAIWVTHRLEELYFCDGAAIVKNGAISNWNSGSKVFQELKSLALR
CCEEEHHHHHHHHHHHEECCHHEECCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPTTWSGYLEFDQVSFSWPNGVNVINQCSFSIVKPGLWMLVGENGSGKSTLFRLINGGI
CCCCCCCCEEEECCEEECCCCCCCHHHHCCHHEECCCEEEEEECCCCCHHHHHHHHHCCC
RPKSGKIFCSLRPSMVYQNPDHQLLMPTCKSELMLSVPKTIPQTNLLDLIHSALEKVDLG
CCCCCEEEEEECCCEEEECCCCCEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHH
EMLDRPIHTLSGGQKQRLALAGAIVSNSNLLLLDEPTALLDPQSQNSVLKVMKKLTSSSA
HHHHHHHHHHCCCCHHHHEEEEEEECCCCEEEEECCHHHCCCCCCHHHHHHHHHHHCCCC
DPITAIWVTHRLEELYFCDGAAIVKNGAISNWNSGSKVFQELKSLALR
CCEEEHHHHHHHHHHHEECCHHEECCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12466555 [H]