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The map label for this gene is yfhF [C]

Identifier: 124024903

GI number: 124024903

Start: 178288

End: 178677

Strand: Direct

Name: yfhF [C]

Synonym: NATL1_01901

Alternate gene names: 124024903

Gene position: 178288-178677 (Clockwise)

Preceding gene: 124024900

Following gene: 124024904

Centisome position: 9.56

GC content: 38.97

Gene sequence:

>390_bases
ATGAGTGAATCAAGCGCACCGCCGACAACTCATAAAGCTCAAGGCGGCAAAGGAGTTCTTATTACCACTCCTGCCTTGGA
TCAGTTGTCTAGACTTTGCAAAGAACAAGGCTCAGGGAAATTATTGAGAGTAGGAGTACGTTCGGGAGGATGCAGTGGTA
TGAGTTACACAATGGATTTTGTGTCTGATGATGATATTCAAAAAGATGATGAAGTCTATGAATATTCAGTTGGTAGCAGT
TCGTTTAAAGTGATTTGTGATCCAAAGAGTCTTTTGTATATATATGGTATGCAGTTAGATTTCAGTACAGATCTAATTGG
TGGAGGTTTTAACTTTACTAATCCCAATGCATCACAAACTTGTGGTTGTGGAAGTTCATTTGCAGTTTAA

Upstream 100 bases:

>100_bases
TAATTAGATGGATACACTAACTCTATGAATAAAAACTCTTTTTTGGCACTTTTAAAATCGAATATAATTAATAGAGTGTT
ATTAAAGTTCAGAAAAAACA

Downstream 100 bases:

>100_bases
CTTTAACTAATAACTAAAAGAATTTTTAAATAACAATGGATCAATCAGAGGAAAGCCTTTTTGAAGAAGCCCTAAATCGA
TATAAGGCTGGTTCACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSESSAPPTTHKAQGGKGVLITTPALDQLSRLCKEQGSGKLLRVGVRSGGCSGMSYTMDFVSDDDIQKDDEVYEYSVGSS
SFKVICDPKSLLYIYGMQLDFSTDLIGGGFNFTNPNASQTCGCGSSFAV

Sequences:

>Translated_129_residues
MSESSAPPTTHKAQGGKGVLITTPALDQLSRLCKEQGSGKLLRVGVRSGGCSGMSYTMDFVSDDDIQKDDEVYEYSVGSS
SFKVICDPKSLLYIYGMQLDFSTDLIGGGFNFTNPNASQTCGCGSSFAV
>Mature_128_residues
SESSAPPTTHKAQGGKGVLITTPALDQLSRLCKEQGSGKLLRVGVRSGGCSGMSYTMDFVSDDDIQKDDEVYEYSVGSSS
FKVICDPKSLLYIYGMQLDFSTDLIGGGFNFTNPNASQTCGCGSSFAV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family. Ycf83 subfamily [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=120, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI160420328, Length=102, Percent_Identity=39.2156862745098, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788877, Length=111, Percent_Identity=40.5405405405405, Blast_Score=85, Evalue=2e-18,
Organism=Escherichia coli, GI1786351, Length=110, Percent_Identity=37.2727272727273, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1787974, Length=113, Percent_Identity=32.7433628318584, Blast_Score=67, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25146411, Length=116, Percent_Identity=32.7586206896552, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193209025, Length=109, Percent_Identity=33.9449541284404, Blast_Score=83, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323001, Length=111, Percent_Identity=37.8378378378378, Blast_Score=74, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24642263, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24649697, Length=112, Percent_Identity=37.5, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13659; Mature: 13528

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESSAPPTTHKAQGGKGVLITTPALDQLSRLCKEQGSGKLLRVGVRSGGCSGMSYTMDF
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC
VSDDDIQKDDEVYEYSVGSSSFKVICDPKSLLYIYGMQLDFSTDLIGGGFNFTNPNASQT
CCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCEECCCCCCCCCCCCCC
CGCGSSFAV
CCCCCCCCC
>Mature Secondary Structure 
SESSAPPTTHKAQGGKGVLITTPALDQLSRLCKEQGSGKLLRVGVRSGGCSGMSYTMDF
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC
VSDDDIQKDDEVYEYSVGSSSFKVICDPKSLLYIYGMQLDFSTDLIGGGFNFTNPNASQT
CCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCEECCCCCCCCCCCCCC
CGCGSSFAV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]