| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024901
Identifier: 124024901
GI number: 124024901
Start: 176266
End: 176718
Strand: Reverse
Name: 124024901
Synonym: NATL1_01881
Alternate gene names: NA
Gene position: 176718-176266 (Counterclockwise)
Preceding gene: 124024902
Following gene: 124024896
Centisome position: 9.48
GC content: 36.42
Gene sequence:
>453_bases ATGGGAAAGTGGCTTGATCACACAGTGATAAGTGAAATTCATGCTCCAGTTGAACTTGTTTGGAAGTTTTGGAGTGATTT AGATTCGATGCCTTTGTGGATGACTTGGATTGAGTCGGTTAAGCCAGTCGATAAAAAAACCTCGACACTTCCTGATTTAA CGGAGTGGACACTTGCAGCTAATGGCTTTCGTTTCAAATGGAAAGCTCAAATCACAGAAAGAGTAGAAGCAGAGAAATTG GAATGGAAATCAGTTGGTGGTTTACCTACTAAGGGTTCAGTACGGTTTTATAGTGAAGAGAGTTCTAAAACTGTGGTTAA ATTAAAAATATCTTATGAATTGCCTCAAGTTTTAGCAAATCTAATGAAAGCAAATATTCTTGGAGGAATGGTCACAAAAG AATTACAAAAAAATCTTGATGGATTTAAAGATCTCGTCGAAAAATCAGGATAA
Upstream 100 bases:
>100_bases TGACTCTATGGAAGGAGCAACAATGAGTGGACATCTTGCTGCTTCAGCAATGCTCTCAAAGTCTGTTTCACTAGCAAAAA ATTCTTCGGTTGCTTAAGAA
Downstream 100 bases:
>100_bases ATTTAATTAAAATTCAGTTCTAAACAAGCTTGCAATAATCCTTCCAAATCATGCGGAGAAGCCTCTTTGTCTGGCTTTCT AATAAGGTTTTTACAGCTAA
Product: putative integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MGKWLDHTVISEIHAPVELVWKFWSDLDSMPLWMTWIESVKPVDKKTSTLPDLTEWTLAANGFRFKWKAQITERVEAEKL EWKSVGGLPTKGSVRFYSEESSKTVVKLKISYELPQVLANLMKANILGGMVTKELQKNLDGFKDLVEKSG
Sequences:
>Translated_150_residues MGKWLDHTVISEIHAPVELVWKFWSDLDSMPLWMTWIESVKPVDKKTSTLPDLTEWTLAANGFRFKWKAQITERVEAEKL EWKSVGGLPTKGSVRFYSEESSKTVVKLKISYELPQVLANLMKANILGGMVTKELQKNLDGFKDLVEKSG >Mature_149_residues GKWLDHTVISEIHAPVELVWKFWSDLDSMPLWMTWIESVKPVDKKTSTLPDLTEWTLAANGFRFKWKAQITERVEAEKLE WKSVGGLPTKGSVRFYSEESSKTVVKLKISYELPQVLANLMKANILGGMVTKELQKNLDGFKDLVEKSG
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17142; Mature: 17011
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWLDHTVISEIHAPVELVWKFWSDLDSMPLWMTWIESVKPVDKKTSTLPDLTEWTLAA CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHC NGFRFKWKAQITERVEAEKLEWKSVGGLPTKGSVRFYSEESSKTVVKLKISYELPQVLAN CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHH LMKANILGGMVTKELQKNLDGFKDLVEKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKWLDHTVISEIHAPVELVWKFWSDLDSMPLWMTWIESVKPVDKKTSTLPDLTEWTLAA CCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHC NGFRFKWKAQITERVEAEKLEWKSVGGLPTKGSVRFYSEESSKTVVKLKISYELPQVLAN CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHH LMKANILGGMVTKELQKNLDGFKDLVEKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA