| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124024889
Identifier: 124024889
GI number: 124024889
Start: 167973
End: 169154
Strand: Reverse
Name: 124024889
Synonym: NATL1_01761
Alternate gene names: NA
Gene position: 169154-167973 (Counterclockwise)
Preceding gene: 124024890
Following gene: 124024888
Centisome position: 9.07
GC content: 31.81
Gene sequence:
>1182_bases ATGAACAATATAAAAATCAAATGGCATGCCACAATCCAAGAAATTCCAAAAATTATTTGGAATAATTTCTTAAAAGGAAA TTCAACTCCTTTTTATAAATGGGATTGGTTGAATGCATTAGAAAGATCAAAAAGTGTTAGTACAAAATATGGATGGCAAC CATTATTTCTCTCTGCGTGGAGTGAAAATAATTTAATTGCATGTGCACCTCTCTATCTTAAATCTCATAGTTATGGAGAA TTTATTTTTGATAATGCCTTTGTTCAACTAGCTCAAGATATGGGACTTCAATATTATCCCAAGCTAATAGGAATGAGTCC ATTAAGTCCAATAGAGGGATATCGCTTTCTGTTTGCAGAAGGAGTTAATGATAGAGACCTCACACAAATATTAATCTCTG AAATTGATAGTTTTGCCAAACAAAATGGAATTCTTAGTTGTAATTTTTTGTATGTAGATCCTAAATGGATGAAAGTAGCT GAATCTCTAAATTGCGCTAAGTGGGTCAACCAACAAAGTCTGTTGACATTGAATGAAGAAAAAAGTTTTTCTGATTTTTT ACAAAAATTCAATTCCAATCAACGTAGAAATATTAAGAGAGAAAGAGAAAGCATAAAAAAATGTGGAGTAAAAGTTGAAG CTCTTAGTGGGTCTCAAATAGATGTAATGAATTTAAAAAAAATGCATTATTTTTATCAGCTTCATTGTTCAAGATGGGGA GTATGGGGAAGTAAATACCTCACGGAATCATTTTTTACTGAACTTAGATCAACAGAACTCAAAGAAAATATTGTTTTATT TGACGCAAAAGAAGTAGGAATTGATAAAACAATTGGAATGTCCTTATGCGTGAAAAACGAAAATATGCTTTGGGGACGAT ATTGGGGTGCAGAAAAAAATATAGATAATTTACATTTTGAAGCTTGTTATTACTCCCCGATTGAGTGGGCAATAGCAAAT AAAATAAAATATTTTGACCCTGGAGCAGGAGGTAGTCACAAAAAACGCAGAGGTTTTATTGCTAAACCCAATGCAAGTCT TCATAGATGGTACAACTTACCTATGGATTCATTAATTAGAGAATGGCTACCAAGAGCAAATAAGTTAATGCTTGATCAAA TAAACGCTACAAATAATGAAGTACCTTTTAAGTTTGAAGAGCCAAAACTATCAAATACATAG
Upstream 100 bases:
>100_bases AACTGGATTCTAAAAGAAAGTAAAAAGCTAGGTAATAACGAATTACTTATAAGATATTTTAGAAATCATTTATCCTGAAT ATAGATTTAGTATAAAATAA
Downstream 100 bases:
>100_bases TAACTTCAGACAAATTAAAGACTGAATCTCAATGACAGATAACAATTTACTAGATTCTCCTGAGACCAATAAATCACTTT CCACCGAGAAAGATACAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNNIKIKWHATIQEIPKIIWNNFLKGNSTPFYKWDWLNALERSKSVSTKYGWQPLFLSAWSENNLIACAPLYLKSHSYGE FIFDNAFVQLAQDMGLQYYPKLIGMSPLSPIEGYRFLFAEGVNDRDLTQILISEIDSFAKQNGILSCNFLYVDPKWMKVA ESLNCAKWVNQQSLLTLNEEKSFSDFLQKFNSNQRRNIKRERESIKKCGVKVEALSGSQIDVMNLKKMHYFYQLHCSRWG VWGSKYLTESFFTELRSTELKENIVLFDAKEVGIDKTIGMSLCVKNENMLWGRYWGAEKNIDNLHFEACYYSPIEWAIAN KIKYFDPGAGGSHKKRRGFIAKPNASLHRWYNLPMDSLIREWLPRANKLMLDQINATNNEVPFKFEEPKLSNT
Sequences:
>Translated_393_residues MNNIKIKWHATIQEIPKIIWNNFLKGNSTPFYKWDWLNALERSKSVSTKYGWQPLFLSAWSENNLIACAPLYLKSHSYGE FIFDNAFVQLAQDMGLQYYPKLIGMSPLSPIEGYRFLFAEGVNDRDLTQILISEIDSFAKQNGILSCNFLYVDPKWMKVA ESLNCAKWVNQQSLLTLNEEKSFSDFLQKFNSNQRRNIKRERESIKKCGVKVEALSGSQIDVMNLKKMHYFYQLHCSRWG VWGSKYLTESFFTELRSTELKENIVLFDAKEVGIDKTIGMSLCVKNENMLWGRYWGAEKNIDNLHFEACYYSPIEWAIAN KIKYFDPGAGGSHKKRRGFIAKPNASLHRWYNLPMDSLIREWLPRANKLMLDQINATNNEVPFKFEEPKLSNT >Mature_393_residues MNNIKIKWHATIQEIPKIIWNNFLKGNSTPFYKWDWLNALERSKSVSTKYGWQPLFLSAWSENNLIACAPLYLKSHSYGE FIFDNAFVQLAQDMGLQYYPKLIGMSPLSPIEGYRFLFAEGVNDRDLTQILISEIDSFAKQNGILSCNFLYVDPKWMKVA ESLNCAKWVNQQSLLTLNEEKSFSDFLQKFNSNQRRNIKRERESIKKCGVKVEALSGSQIDVMNLKKMHYFYQLHCSRWG VWGSKYLTESFFTELRSTELKENIVLFDAKEVGIDKTIGMSLCVKNENMLWGRYWGAEKNIDNLHFEACYYSPIEWAIAN KIKYFDPGAGGSHKKRRGFIAKPNASLHRWYNLPMDSLIREWLPRANKLMLDQINATNNEVPFKFEEPKLSNT
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45841; Mature: 45841
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIKIKWHATIQEIPKIIWNNFLKGNSTPFYKWDWLNALERSKSVSTKYGWQPLFLSAW CCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCHHCCCCEEEEEEC SENNLIACAPLYLKSHSYGEFIFDNAFVQLAQDMGLQYYPKLIGMSPLSPIEGYRFLFAE CCCCEEEEEEHEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEC GVNDRDLTQILISEIDSFAKQNGILSCNFLYVDPKWMKVAESLNCAKWVNQQSLLTLNEE CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCHHHHCCCCCEEEECCC KSFSDFLQKFNSNQRRNIKRERESIKKCGVKVEALSGSQIDVMNLKKMHYFYQLHCSRWG CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHEEEHHHCC VWGSKYLTESFFTELRSTELKENIVLFDAKEVGIDKTIGMSLCVKNENMLWGRYWGAEKN CCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCCCCCCCCEEEEEECCCEEEEEECCCCCC IDNLHFEACYYSPIEWAIANKIKYFDPGAGGSHKKRRGFIAKPNASLHRWYNLPMDSLIR CCCEEEEEEECCCHHHHHHCCEEEECCCCCCCCHHHCCEEECCCCCHHHEECCCHHHHHH EWLPRANKLMLDQINATNNEVPFKFEEPKLSNT HHCCCCCCEEHHHCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MNNIKIKWHATIQEIPKIIWNNFLKGNSTPFYKWDWLNALERSKSVSTKYGWQPLFLSAW CCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCHHCCCCEEEEEEC SENNLIACAPLYLKSHSYGEFIFDNAFVQLAQDMGLQYYPKLIGMSPLSPIEGYRFLFAE CCCCEEEEEEHEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEC GVNDRDLTQILISEIDSFAKQNGILSCNFLYVDPKWMKVAESLNCAKWVNQQSLLTLNEE CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCHHHHCCCCCEEEECCC KSFSDFLQKFNSNQRRNIKRERESIKKCGVKVEALSGSQIDVMNLKKMHYFYQLHCSRWG CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHEEEHHHCC VWGSKYLTESFFTELRSTELKENIVLFDAKEVGIDKTIGMSLCVKNENMLWGRYWGAEKN CCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCCCCCCCCEEEEEECCCEEEEEECCCCCC IDNLHFEACYYSPIEWAIANKIKYFDPGAGGSHKKRRGFIAKPNASLHRWYNLPMDSLIR CCCEEEEEEECCCHHHHHHCCEEEECCCCCCCCHHHCCEEECCCCCHHHEECCCHHHHHH EWLPRANKLMLDQINATNNEVPFKFEEPKLSNT HHCCCCCCEEHHHCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA