| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024883
Identifier: 124024883
GI number: 124024883
Start: 163558
End: 164217
Strand: Direct
Name: 124024883
Synonym: NATL1_01701
Alternate gene names: NA
Gene position: 163558-164217 (Clockwise)
Preceding gene: 124024876
Following gene: 124024884
Centisome position: 8.77
GC content: 38.79
Gene sequence:
>660_bases TTGCAATTTTGGGCTAGCACAATGGTTGTCCTGCCAGTGTTTGTTCAGGCTCCATGGGTTCATGTGTTCCCTTTTTCAGC TTTTTTATTTAGTTTCATAATTTTTTTTCTTGGATTTTATTTACTTAAATTTTGTAGTGATAGATGGTCCTCTATTGGTT CGCTATTGGTTGGTGTGAGTTGGAGCTGGTTAGGAGGATGTCTTTTTTGGGGATGGTTAAGAGCTCATCCTGTGTGGCAT TTGCCTGTTGAGTCAATAGCTTTACCAATAGCAGTAAGCCTCTTACAGACTCGATGGAAAATCGGGGCCAGTTTTTATTT GGCATCTCTATTAGGAACTGCTTTTACTGACGTAATGATTGTTTTAACTGGTGTCATGAAGGCTTGGCCTGAAGTTGTAG ATGCGCCTTTTTCAGAAGCTTCCAAAATGTTGAGTTTCACTGCCGAACAATTATTGGAACCTCTTTCATTATTTGCCATT TTAATAGCGGCACTTTTAATAATTTTGATAGCAAATTGGATGCATCAAAAATCAAAAAGTGAGCCTTTGTCTTCTGATGC TTGGCTTGTATCAAGTTCAGCCTTGACAACAACCTTGTGGGTTGATGGCTTATTTTTTGCTACCACATTGATTCAGCCTC AATTAAGTGGATTGATCTGA
Upstream 100 bases:
>100_bases TGAGCTGAAAACCAACTCAGTTTTATTAATTCTGATTTACTCAAACAATCCCACCAATCCCATAAATCAAGAAACGTCCT ACCTGTCAAAGCCAAGGACA
Downstream 100 bases:
>100_bases AAACTAATCTTTTATGGATTTAAATACTGGGTTTAATAAAAATGATATTTACTCAACTAATTGGGATGTAATTGTTATTG GAGCAGGAGCTGCAGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MQFWASTMVVLPVFVQAPWVHVFPFSAFLFSFIIFFLGFYLLKFCSDRWSSIGSLLVGVSWSWLGGCLFWGWLRAHPVWH LPVESIALPIAVSLLQTRWKIGASFYLASLLGTAFTDVMIVLTGVMKAWPEVVDAPFSEASKMLSFTAEQLLEPLSLFAI LIAALLIILIANWMHQKSKSEPLSSDAWLVSSSALTTTLWVDGLFFATTLIQPQLSGLI
Sequences:
>Translated_219_residues MQFWASTMVVLPVFVQAPWVHVFPFSAFLFSFIIFFLGFYLLKFCSDRWSSIGSLLVGVSWSWLGGCLFWGWLRAHPVWH LPVESIALPIAVSLLQTRWKIGASFYLASLLGTAFTDVMIVLTGVMKAWPEVVDAPFSEASKMLSFTAEQLLEPLSLFAI LIAALLIILIANWMHQKSKSEPLSSDAWLVSSSALTTTLWVDGLFFATTLIQPQLSGLI >Mature_219_residues MQFWASTMVVLPVFVQAPWVHVFPFSAFLFSFIIFFLGFYLLKFCSDRWSSIGSLLVGVSWSWLGGCLFWGWLRAHPVWH LPVESIALPIAVSLLQTRWKIGASFYLASLLGTAFTDVMIVLTGVMKAWPEVVDAPFSEASKMLSFTAEQLLEPLSLFAI LIAALLIILIANWMHQKSKSEPLSSDAWLVSSSALTTTLWVDGLFFATTLIQPQLSGLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24438; Mature: 24438
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFWASTMVVLPVFVQAPWVHVFPFSAFLFSFIIFFLGFYLLKFCSDRWSSIGSLLVGVS CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WSWLGGCLFWGWLRAHPVWHLPVESIALPIAVSLLQTRWKIGASFYLASLLGTAFTDVMI HHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTGVMKAWPEVVDAPFSEASKMLSFTAEQLLEPLSLFAILIAALLIILIANWMHQKSKS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPLSSDAWLVSSSALTTTLWVDGLFFATTLIQPQLSGLI CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFWASTMVVLPVFVQAPWVHVFPFSAFLFSFIIFFLGFYLLKFCSDRWSSIGSLLVGVS CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WSWLGGCLFWGWLRAHPVWHLPVESIALPIAVSLLQTRWKIGASFYLASLLGTAFTDVMI HHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTGVMKAWPEVVDAPFSEASKMLSFTAEQLLEPLSLFAILIAALLIILIANWMHQKSKS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPLSSDAWLVSSSALTTTLWVDGLFFATTLIQPQLSGLI CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA