| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is trkG [H]
Identifier: 124024863
GI number: 124024863
Start: 147720
End: 149105
Strand: Direct
Name: trkG [H]
Synonym: NATL1_01501
Alternate gene names: 124024863
Gene position: 147720-149105 (Clockwise)
Preceding gene: 124024862
Following gene: 124024864
Centisome position: 7.92
GC content: 34.78
Gene sequence:
>1386_bases GTGAGTATTAGGCAAGAAACTTATAGAAGGCTTACGGTTCCGCAGTTTACAGTGGTAACAGGTTTACTTGTGATTGCTTT TGGAACATTATTATTGGCTACACCTTTTTGTTCTAATGCAAATGTAGGTCTATGGGAGGCATTATTTACGGCAACTTCTG CTGTCACAGTTACGGGGTTATCTATTATTGATATAGGAATAGATTTGACATTTTTTGGACAAGTAATTTTAGCGATTATG TTGTTAACTGGGGGCCTTGGTTTAATGGCTATTACTACATTTTTGCAGGGCTTTATTGTTAGTGGAACAGAATTAAAAAC ACGTCTTGATAGAGGGAAAACTCTTGATGAATTTGGAGTCGGGGGTGTGGGTACAACGTTTAAAGGTATTGCGATTACAG CATCTATACTTATTTTTCTTGGTTCTATTACTTTGTATTTTTTCGGCTTTAAAAATATAACTAGCTCAAGTGAAAGGATT TGGGCATCAATTTTTCATAGTATATCTGCTTACAATAATGCTGGGTTCAGTTTATGGTCAAGCAGCTTACAAAATTATAG AGGTAATTGGGTAGTGAATTTTGTTTTAATTACTTTAATTATATTAGGTGGTTTTGGATGGAGAGTAACTAATGATATTT GGATAAATCGTAGATCTTTAAAATTAAGAAATTTAAGTCTTCATACACGTTTAGTAATTAGATCATCTTTCATATTGATT GCTCTGGGATTCTTTGGATTGATTTTTACTGAATCGTTAGCTAGGGGTAGCTTCTTTTCGTTAATTAATTTCGATGATCG TATTTTAACCGCTTTATTTACTTCTGTTAGTTCACGAACTGCAGGCTTTACGAATTTGCCCATATCAATTGAAAGTGTCT CTGACTCAGGTCTCTTGTTGATAATGTTTCTTATGTTTATTGGGGCAAGTCCAGGAGGCACTGGAGGCGGAATTAAGACG ACAACTATTGCTGCATTAATGGCAGCCACAAGAGCAACTCTACGTGGTCAAAATGAAATTATTATTCGGAATCGTCAGAT ATCTGACAAAGTAATTCTTAAAGCTGTTGGTATAACTGTTGGTTCATTTTTATTTGTGTTGATTATGGCTTTATTATTAA GTTTGAGTAATGGATTCAATAGTGGAGAGAATTTTTCATTTTTAGAAATGCTTTTCACTTGTATTTCTGCTTTTGCAACT GTAGGTTTTGATCTGGGCGTAACCTCTAAGTTAGGACATGTCGGTCAATTAATTCTGATTATTGGAATGTTTGTTGGCAG ACTAGGAATCCTTTTATTCTTGAGCGCTGTATGGCAAGCTCTTAATAAAAGTAAGATTCAACATCGCAATCGAATTGGCT ATCCGAAGGAGGATCTCTATGTTTAA
Upstream 100 bases:
>100_bases TGTTGGATATGATTATTAACTTAGGAAAAAATTTAAAGCTTCCATTTGATTTTGATTATTTAATCTTTTCAGAATTAGTC TCAATCTATTTTCAAAAAAA
Downstream 100 bases:
>100_bases GGAGGACAAATCATGAGTGATTGGTGGCAATGGTCTCCCATAAAAGCAAATCAGAAACTTGGGTTTGCTGTAGTTGGAAT TGGTCGTTTTGGAAGCGCAG
Product: Trk family sodium transporter
Products: NA
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSIRQETYRRLTVPQFTVVTGLLVIAFGTLLLATPFCSNANVGLWEALFTATSAVTVTGLSIIDIGIDLTFFGQVILAIM LLTGGLGLMAITTFLQGFIVSGTELKTRLDRGKTLDEFGVGGVGTTFKGIAITASILIFLGSITLYFFGFKNITSSSERI WASIFHSISAYNNAGFSLWSSSLQNYRGNWVVNFVLITLIILGGFGWRVTNDIWINRRSLKLRNLSLHTRLVIRSSFILI ALGFFGLIFTESLARGSFFSLINFDDRILTALFTSVSSRTAGFTNLPISIESVSDSGLLLIMFLMFIGASPGGTGGGIKT TTIAALMAATRATLRGQNEIIIRNRQISDKVILKAVGITVGSFLFVLIMALLLSLSNGFNSGENFSFLEMLFTCISAFAT VGFDLGVTSKLGHVGQLILIIGMFVGRLGILLFLSAVWQALNKSKIQHRNRIGYPKEDLYV
Sequences:
>Translated_461_residues MSIRQETYRRLTVPQFTVVTGLLVIAFGTLLLATPFCSNANVGLWEALFTATSAVTVTGLSIIDIGIDLTFFGQVILAIM LLTGGLGLMAITTFLQGFIVSGTELKTRLDRGKTLDEFGVGGVGTTFKGIAITASILIFLGSITLYFFGFKNITSSSERI WASIFHSISAYNNAGFSLWSSSLQNYRGNWVVNFVLITLIILGGFGWRVTNDIWINRRSLKLRNLSLHTRLVIRSSFILI ALGFFGLIFTESLARGSFFSLINFDDRILTALFTSVSSRTAGFTNLPISIESVSDSGLLLIMFLMFIGASPGGTGGGIKT TTIAALMAATRATLRGQNEIIIRNRQISDKVILKAVGITVGSFLFVLIMALLLSLSNGFNSGENFSFLEMLFTCISAFAT VGFDLGVTSKLGHVGQLILIIGMFVGRLGILLFLSAVWQALNKSKIQHRNRIGYPKEDLYV >Mature_460_residues SIRQETYRRLTVPQFTVVTGLLVIAFGTLLLATPFCSNANVGLWEALFTATSAVTVTGLSIIDIGIDLTFFGQVILAIML LTGGLGLMAITTFLQGFIVSGTELKTRLDRGKTLDEFGVGGVGTTFKGIAITASILIFLGSITLYFFGFKNITSSSERIW ASIFHSISAYNNAGFSLWSSSLQNYRGNWVVNFVLITLIILGGFGWRVTNDIWINRRSLKLRNLSLHTRLVIRSSFILIA LGFFGLIFTESLARGSFFSLINFDDRILTALFTSVSSRTAGFTNLPISIESVSDSGLLLIMFLMFIGASPGGTGGGIKTT TIAALMAATRATLRGQNEIIIRNRQISDKVILKAVGITVGSFLFVLIMALLLSLSNGFNSGENFSFLEMLFTCISAFATV GFDLGVTSKLGHVGQLILIIGMFVGRLGILLFLSAVWQALNKSKIQHRNRIGYPKEDLYV
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 50133; Mature: 50002
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRQETYRRLTVPQFTVVTGLLVIAFGTLLLATPFCSNANVGLWEALFTATSAVTVTGL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECC SIIDIGIDLTFFGQVILAIMLLTGGLGLMAITTFLQGFIVSGTELKTRLDRGKTLDEFGV EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCC GGVGTTFKGIAITASILIFLGSITLYFFGFKNITSSSERIWASIFHSISAYNNAGFSLWS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH SSLQNYRGNWVVNFVLITLIILGGFGWRVTNDIWINRRSLKLRNLSLHTRLVIRSSFILI HHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEEECCHHHHHHHHHHHHHHH ALGFFGLIFTESLARGSFFSLINFDDRILTALFTSVSSRTAGFTNLPISIESVSDSGLLL HHHHHHHHHHHHHHCCCCEEHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHH IMFLMFIGASPGGTGGGIKTTTIAALMAATRATLRGQNEIIIRNRQISDKVILKAVGITV HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH GSFLFVLIMALLLSLSNGFNSGENFSFLEMLFTCISAFATVGFDLGVTSKLGHVGQLILI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IGMFVGRLGILLFLSAVWQALNKSKIQHRNRIGYPKEDLYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure SIRQETYRRLTVPQFTVVTGLLVIAFGTLLLATPFCSNANVGLWEALFTATSAVTVTGL CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECC SIIDIGIDLTFFGQVILAIMLLTGGLGLMAITTFLQGFIVSGTELKTRLDRGKTLDEFGV EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCC GGVGTTFKGIAITASILIFLGSITLYFFGFKNITSSSERIWASIFHSISAYNNAGFSLWS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH SSLQNYRGNWVVNFVLITLIILGGFGWRVTNDIWINRRSLKLRNLSLHTRLVIRSSFILI HHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEEECCHHHHHHHHHHHHHHH ALGFFGLIFTESLARGSFFSLINFDDRILTALFTSVSSRTAGFTNLPISIESVSDSGLLL HHHHHHHHHHHHHHCCCCEEHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHH IMFLMFIGASPGGTGGGIKTTTIAALMAATRATLRGQNEIIIRNRQISDKVILKAVGITV HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH GSFLFVLIMALLLSLSNGFNSGENFSFLEMLFTCISAFATVGFDLGVTSKLGHVGQLILI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IGMFVGRLGILLFLSAVWQALNKSKIQHRNRIGYPKEDLYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]