| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is citT [C]
Identifier: 124024861
GI number: 124024861
Start: 145799
End: 147616
Strand: Direct
Name: citT [C]
Synonym: NATL1_01481
Alternate gene names: 124024861
Gene position: 145799-147616 (Clockwise)
Preceding gene: 124024860
Following gene: 124024862
Centisome position: 7.82
GC content: 40.43
Gene sequence:
>1818_bases ATGAATGAGATATCCACTGTCTTAGATAATCCCAAAGCTGTCATAACTTTGGCAGTGTTAATTATTGCTGTTTTTTTGTT CGTAAGCAGTGCTCTAGCTCCTGAGCTGACTGGACTTTTGAGCGTTGCATTATTGATGGCTACAGGAGTTCTCTCCCCTC AAAAAGCATTGGCTGGTTTTGGAAGCCCAGCGTTGATTACATTGATGGGTTTATTTGCTGTTTCTGCTGCACTTTTTAAA AGTGGTGCCCTTGATCGTTTAAGGGAGTTAATTGCTTCTGAAAGTATTCGAACGCCGCGCAGATTGATAGCTTTGCTCGG ATTAGTTGTTGCTCCTGTCTCAGGTGTTGTTCCCAATACCCCTGTGGTTGCTTCACTTTTACCAGTAATCGAAGCTTGGT GCGTCAAGCGAAAACTATCTCCATCACGTGTATTGTTACCATTATCTTTCGCGACAGTATTAGGTGGCACTTTAACTCTT TTAGGCAGTTCAGTGAATTTGTTGGTCAGCGATATTAGTGATCAACTTGGTTACGGTCCCTTTGATTTATTTACTTTTAC AGCAATAGGAGTACCTATATGGTTATTTGGGACAGCATATATGTTGCTGGCTCCACAATCTCTATTGCCAGATAGAGGGA GAATTAGCTCAGAGTATGGAGGAAGTTCGGATCAAACTGGTTATTTTACCGAAGTCACAATTCCTTCTGATTCTGAACTT GTTGGACATTCATTGAGAAATAGCCGCTTACAAAGAAGATTTGATGTTGATGTTCTAGAAATACAGCGAGAAAATGAAAT ACTTTTACCCCCTTTAGCCGATCGGATAATTCAGTCTGGTGATCGGTTGTTGATAAGAATTACGCGCTCTGATCTTTTGC GTTTAAAACAAGAACATACTGTTCAGTTAAATAAAAACTTAAATATTGAAAAAAATTTTTTTCTGTCCAACATTGATGAA AGTCAACAAACGGTAGAGGTTCTTTTGCCAGCTGGTTCAACCTTGGCTGGGGCAAGTTTGCGTGAACTGCGATTTAGACA AAGACACAATGCTACTGTTTTGGCCTTACGACGGGGTCAGCAAACTGTTCAAGAGAGATTGGGACAAGCAATTTTGAGAG AAGGAGACGTATTACTCTTACAAGCTCCAAGAGATTCAATTCGTGGATTACAGGATAGTAATGACCTTCTTGTTTTAGAT CAATTTGAGAATGATCTACCCACTGTTACAAGAAAACCGATAGCAATTGGCATCGCAATCGCAATGTTGATTATTCCCTC AATTACTGACTTGCCTCTAGTAGCTTCAGTTCTAATGGCAGTGATTGCTATGGTCTGGGGAGGATGTTTAAGACCCGCAG AGGTACAAAGATCAATCCGACTTGACGTCATTCTTTTGCTGGGATCTCTTTCAAGTTTTAGTGTCGCAATGCAGACCACT GGTCTTGCTGATGCTTTTGCCAATATTTTAATTTTAATATTGAAAGACTTATCTACTTATTCCGCCTTACTAGTAATTTT CCTCTCTACTACAATATTTACTCAATTTGTTAGTAATGCTGCTTCAGTGGCTCTTTTGGCGCCAATTGCTGTTCAATTGG CCCCAAGTATGGGGCTACCTCCTTTGGCTTTATTGATAACAGTTCTTTTTGGCGCCAGTCAATCTTTTCTTACTCCTATG GGTTACCAGACAAACCTTATGGTATTTGGCCCTGGGCGTTATCAGTTTTTAGATGTCACCAGATACGGAGCTGGGTTGAC CATCTTGATGACGCTTCTTGTCCCTGGGTTGATATTGCTAAAGTATGGTATTTCTTAA
Upstream 100 bases:
>100_bases ATTAATCGTTTATTTTCTCAATATCCTTAGTTCCTTTTCACAGTATTCTTAAAATCAATACTTGGACAGAGTCAGTTGAA AAGGTTATTAATTAAATAAT
Downstream 100 bases:
>100_bases ATATGTTGGATATGATTATTAACTTAGGAAAAAATTTAAAGCTTCCATTTGATTTTGATTATTTAATCTTTTCAGAATTA GTCTCAATCTATTTTCAAAA
Product: DASS family sodium/sulfate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MNEISTVLDNPKAVITLAVLIIAVFLFVSSALAPELTGLLSVALLMATGVLSPQKALAGFGSPALITLMGLFAVSAALFK SGALDRLRELIASESIRTPRRLIALLGLVVAPVSGVVPNTPVVASLLPVIEAWCVKRKLSPSRVLLPLSFATVLGGTLTL LGSSVNLLVSDISDQLGYGPFDLFTFTAIGVPIWLFGTAYMLLAPQSLLPDRGRISSEYGGSSDQTGYFTEVTIPSDSEL VGHSLRNSRLQRRFDVDVLEIQRENEILLPPLADRIIQSGDRLLIRITRSDLLRLKQEHTVQLNKNLNIEKNFFLSNIDE SQQTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQQTVQERLGQAILREGDVLLLQAPRDSIRGLQDSNDLLVLD QFENDLPTVTRKPIAIGIAIAMLIIPSITDLPLVASVLMAVIAMVWGGCLRPAEVQRSIRLDVILLLGSLSSFSVAMQTT GLADAFANILILILKDLSTYSALLVIFLSTTIFTQFVSNAASVALLAPIAVQLAPSMGLPPLALLITVLFGASQSFLTPM GYQTNLMVFGPGRYQFLDVTRYGAGLTILMTLLVPGLILLKYGIS
Sequences:
>Translated_605_residues MNEISTVLDNPKAVITLAVLIIAVFLFVSSALAPELTGLLSVALLMATGVLSPQKALAGFGSPALITLMGLFAVSAALFK SGALDRLRELIASESIRTPRRLIALLGLVVAPVSGVVPNTPVVASLLPVIEAWCVKRKLSPSRVLLPLSFATVLGGTLTL LGSSVNLLVSDISDQLGYGPFDLFTFTAIGVPIWLFGTAYMLLAPQSLLPDRGRISSEYGGSSDQTGYFTEVTIPSDSEL VGHSLRNSRLQRRFDVDVLEIQRENEILLPPLADRIIQSGDRLLIRITRSDLLRLKQEHTVQLNKNLNIEKNFFLSNIDE SQQTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQQTVQERLGQAILREGDVLLLQAPRDSIRGLQDSNDLLVLD QFENDLPTVTRKPIAIGIAIAMLIIPSITDLPLVASVLMAVIAMVWGGCLRPAEVQRSIRLDVILLLGSLSSFSVAMQTT GLADAFANILILILKDLSTYSALLVIFLSTTIFTQFVSNAASVALLAPIAVQLAPSMGLPPLALLITVLFGASQSFLTPM GYQTNLMVFGPGRYQFLDVTRYGAGLTILMTLLVPGLILLKYGIS >Mature_605_residues MNEISTVLDNPKAVITLAVLIIAVFLFVSSALAPELTGLLSVALLMATGVLSPQKALAGFGSPALITLMGLFAVSAALFK SGALDRLRELIASESIRTPRRLIALLGLVVAPVSGVVPNTPVVASLLPVIEAWCVKRKLSPSRVLLPLSFATVLGGTLTL LGSSVNLLVSDISDQLGYGPFDLFTFTAIGVPIWLFGTAYMLLAPQSLLPDRGRISSEYGGSSDQTGYFTEVTIPSDSEL VGHSLRNSRLQRRFDVDVLEIQRENEILLPPLADRIIQSGDRLLIRITRSDLLRLKQEHTVQLNKNLNIEKNFFLSNIDE SQQTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQQTVQERLGQAILREGDVLLLQAPRDSIRGLQDSNDLLVLD QFENDLPTVTRKPIAIGIAIAMLIIPSITDLPLVASVLMAVIAMVWGGCLRPAEVQRSIRLDVILLLGSLSSFSVAMQTT GLADAFANILILILKDLSTYSALLVIFLSTTIFTQFVSNAASVALLAPIAVQLAPSMGLPPLALLITVLFGASQSFLTPM GYQTNLMVFGPGRYQFLDVTRYGAGLTILMTLLVPGLILLKYGIS
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK C-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1788629, Length=603, Percent_Identity=25.8706467661692, Blast_Score=180, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 - InterPro: IPR006037 [H]
Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 65221; Mature: 65221
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS01271 NA_SULFATE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEISTVLDNPKAVITLAVLIIAVFLFVSSALAPELTGLLSVALLMATGVLSPQKALAGF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC GSPALITLMGLFAVSAALFKSGALDRLRELIASESIRTPRRLIALLGLVVAPVSGVVPNT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC PVVASLLPVIEAWCVKRKLSPSRVLLPLSFATVLGGTLTLLGSSVNLLVSDISDQLGYGP HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC FDLFTFTAIGVPIWLFGTAYMLLAPQSLLPDRGRISSEYGGSSDQTGYFTEVTIPSDSEL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH VGHSLRNSRLQRRFDVDVLEIQRENEILLPPLADRIIQSGDRLLIRITRSDLLRLKQEHT HHHHHHHHHHHHHCCCHHEEEECCCCEECCHHHHHHHCCCCEEEEEECHHHHHHHHHHHE VQLNKNLNIEKNFFLSNIDESQQTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQ EEECCCCCCCCCHHHCCCCCHHHHHHHEECCCCCHHCCHHHHHHHHHHCCCEEEEECCCH QTVQERLGQAILREGDVLLLQAPRDSIRGLQDSNDLLVLDQFENDLPTVTRKPIAIGIAI HHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH AMLIIPSITDLPLVASVLMAVIAMVWGGCLRPAEVQRSIRLDVILLLGSLSSFSVAMQTT HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GLADAFANILILILKDLSTYSALLVIFLSTTIFTQFVSNAASVALLAPIAVQLAPSMGLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PLALLITVLFGASQSFLTPMGYQTNLMVFGPGRYQFLDVTRYGAGLTILMTLLVPGLILL HHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCEEEEEEHHHCCHHHHHHHHHHHHHHHH KYGIS HHCCC >Mature Secondary Structure MNEISTVLDNPKAVITLAVLIIAVFLFVSSALAPELTGLLSVALLMATGVLSPQKALAGF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC GSPALITLMGLFAVSAALFKSGALDRLRELIASESIRTPRRLIALLGLVVAPVSGVVPNT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC PVVASLLPVIEAWCVKRKLSPSRVLLPLSFATVLGGTLTLLGSSVNLLVSDISDQLGYGP HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC FDLFTFTAIGVPIWLFGTAYMLLAPQSLLPDRGRISSEYGGSSDQTGYFTEVTIPSDSEL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH VGHSLRNSRLQRRFDVDVLEIQRENEILLPPLADRIIQSGDRLLIRITRSDLLRLKQEHT HHHHHHHHHHHHHCCCHHEEEECCCCEECCHHHHHHHCCCCEEEEEECHHHHHHHHHHHE VQLNKNLNIEKNFFLSNIDESQQTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQ EEECCCCCCCCCHHHCCCCCHHHHHHHEECCCCCHHCCHHHHHHHHHHCCCEEEEECCCH QTVQERLGQAILREGDVLLLQAPRDSIRGLQDSNDLLVLDQFENDLPTVTRKPIAIGIAI HHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH AMLIIPSITDLPLVASVLMAVIAMVWGGCLRPAEVQRSIRLDVILLLGSLSSFSVAMQTT HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GLADAFANILILILKDLSTYSALLVIFLSTTIFTQFVSNAASVALLAPIAVQLAPSMGLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PLALLITVLFGASQSFLTPMGYQTNLMVFGPGRYQFLDVTRYGAGLTILMTLLVPGLILL HHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCEEEEEEHHHCCHHHHHHHHHHHHHHHH KYGIS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]