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The map label for this gene is sufB [C]

Identifier: 124024850

GI number: 124024850

Start: 134017

End: 135459

Strand: Reverse

Name: sufB [C]

Synonym: NATL1_01371

Alternate gene names: 124024850

Gene position: 135459-134017 (Counterclockwise)

Preceding gene: 124024856

Following gene: 124024849

Centisome position: 7.26

GC content: 35.97

Gene sequence:

>1443_bases
ATGACCCAATCTAATACTGTTGAAGAAATTGTTTCCCAACCTTATAAATACGGTTTTATAACTGAAATTGAAACTGAAAA
GATCCCAAAAGGATTGAATGAAGATGTCATTAGGTTAATTTCCTCCAAAAAAAATGAGCCAGAATTTTTATTAAAATTTC
GTTTAAGAGCTTATGAGCAATGGTTGAAGATGAAAGAACCTGATTGGTCAGGCTTAACTTATTCCAAAGTAGATTATCAG
GATCTTGTTTATTATGCAGCCCCAAAACAAGACATTAAGAAGAAGAGTTTAGATGAAGTCGATCCTAAATTACTTGAAAC
TTTTGAAAAGCTTGGGATACCACTTAGTGAACAAAAAAGATTATCTAATGTAGCTGTAGATGCTGTCTTTGACAGTGTTT
CTATAGCAACTACATACAAGGAAAAGCTAGCTGAACATGGAGTAATTTTCTGCTCTATTAGCGAGGCAATTAGCGAATAC
CCTGATCTAATTGAAAAATATATGGGTACAGTCGTTCCTCTAAATGATAACTTTTTTGCAGCTCTAAACTCTGCAGTTTT
TAGTGATGGTTCGTTTGTTTACATACCCAAAGGTGTCGAATGTCCAATGGAACTATCATCTTATTTTAGAATAAATTCTG
GCGACACTGGTCAATTCGAACGAACTTTAATTATTGCCGAAGAATCCTCCTCCGTTAGTTATCTAGAGGGCTGTACAGCG
CCTATGTTTGATACCAATACACTCCATGCTGCTGTTGTTGAGCTTGTCGCGCTCGATAATGCATCTATCAAATATTCAAC
TGTGCAAAATTGGTATGCAGGTAATGAAGAAGGAGTTGGAGGAATATATAACTTCGTCACAAAAAGAGGGGAATGTAGAG
GAAAGAAAAGCAAAATAAGCTGGTCTCAAGTCGAAACAGGTTCTGCAATTACATGGAAATACCCAAGTTGCGTATTACAA
GGAGACAATTCCATTGGTGAGTTTTATTCAATTGCACTTACTAATAATTGTCAGAAAGCGGATACTGGGACAAAAATGAT
TCACATAGGAAAAAATACAAAATCAAAAATCGTAAGTAAAGGTATCAGTGCTGGAAAGTCTAAGAATAGCTATCGAGGTC
TTGTATCCATAAGTCCAAATGCTGAGGGCGCTCGAAATTACAGTCAATGTGACTCAATGTTGATCGGTGACAAAGCCAGT
GCAAATACATATCCATATATTCAATCCAAACAACCTCAGTCAAATATTGAACATGAAGCTAGTACTTGTAGGATTTCAGA
AGATCAACTTTTTTACTTACAAAGTAGAGGAATTGATTTCGAGGAATCAGTCTCAATGTTAGTCAGTGGATTTTGTAGTG
ATGTTTTCAATGAACTACCTATGGAGTTTGCATCTGAGGCAGACAAACTTTTAGCTTTAAAATTGGAGGGTTCGGTTGGA
TAA

Upstream 100 bases:

>100_bases
TGATGAGCCCCAAATGTCATAATTGAAGATTATCTTGGATCTTAAAAGCCAAACTTTTCATAAATAAAAAACTACTACGT
CTTGATTTAATCAAAATAAA

Downstream 100 bases:

>100_bases
AAATAAATTAAAACCATACTTTTGCTCTCTACAACTTTCTACCTAATTTAGTGATTTCATCAACTTCAGAAACAATATTA
TCTATTAAAGATCTTCATGC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTQSNTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISSKKNEPEFLLKFRLRAYEQWLKMKEPDWSGLTYSKVDYQ
DLVYYAAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEY
PDLIEKYMGTVVPLNDNFFAALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKISWSQVETGSAITWKYPSCVLQ
GDNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVSKGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKAS
ANTYPYIQSKQPQSNIEHEASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSVG

Sequences:

>Translated_480_residues
MTQSNTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISSKKNEPEFLLKFRLRAYEQWLKMKEPDWSGLTYSKVDYQ
DLVYYAAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEY
PDLIEKYMGTVVPLNDNFFAALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKISWSQVETGSAITWKYPSCVLQ
GDNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVSKGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKAS
ANTYPYIQSKQPQSNIEHEASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSVG
>Mature_479_residues
TQSNTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISSKKNEPEFLLKFRLRAYEQWLKMKEPDWSGLTYSKVDYQD
LVYYAAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEYP
DLIEKYMGTVVPLNDNFFAALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCTAP
MFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKISWSQVETGSAITWKYPSCVLQG
DNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVSKGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKASA
NTYPYIQSKQPQSNIEHEASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=60.5427974947808, Blast_Score=617, Evalue=1e-178,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=26.1437908496732, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53354; Mature: 53222

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSNTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISSKKNEPEFLLKFRLRAYEQ
CCCCCHHHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
WLKMKEPDWSGLTYSKVDYQDLVYYAAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKR
HHHCCCCCCCCCEECCCCHHHEEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
LSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEYPDLIEKYMGTVVPLNDNFFA
HHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCEEEECCCCHHH
ALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCCEEEEEEEEECCCCCHHHHCCCC
PMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKIS
CCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
WSQVETGSAITWKYPSCVLQGDNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVSK
HHHCCCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHH
GISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKASANTYPYIQSKQPQSNIEHEA
HHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCHHCCCCH
STCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSVG
HHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure 
TQSNTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISSKKNEPEFLLKFRLRAYEQ
CCCCHHHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
WLKMKEPDWSGLTYSKVDYQDLVYYAAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKR
HHHCCCCCCCCCEECCCCHHHEEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
LSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEYPDLIEKYMGTVVPLNDNFFA
HHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCEEEECCCCHHH
ALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCCEEEEEEEEECCCCCHHHHCCCC
PMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKIS
CCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
WSQVETGSAITWKYPSCVLQGDNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVSK
HHHCCCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHH
GISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKASANTYPYIQSKQPQSNIEHEA
HHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCHHCCCCH
STCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSVG
HHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]