Click here to switch to the map view.

The map label for this gene is sufC [C]

Identifier: 124024849

GI number: 124024849

Start: 133175

End: 133966

Strand: Reverse

Name: sufC [C]

Synonym: NATL1_01361

Alternate gene names: 124024849

Gene position: 133966-133175 (Counterclockwise)

Preceding gene: 124024850

Following gene: 124024848

Centisome position: 7.18

GC content: 35.86

Gene sequence:

>792_bases
GTGATTTCATCAACTTCAGAAACAATATTATCTATTAAAGATCTTCATGCCAGTGTTGAGGATCAAGAGATACTTCATGG
AGTCAATCTGTTAGTAAAAGAAGGAGAAATCCATGCGATTATGGGTCGCAATGGAAGCGGAAAAAGTACACTTTCAAAAG
TTATTGCTGGTCATCCAGCTTACAAAGTTTTATCGGGATCTATCCAATTTAAAGGTAAGAATATTCTTGAGCTAGAACCA
GAGGAAAGAGCAAGAATTGGTATCTTCCTTGGTTTCCAATACCCAGTAGAAATTCCCGGTGTTAGTAATCTCGAATTCTT
AAGAGTTGCCACCAATTCAAGAAGAAAAGAATTACTTAAAAGTGAATTAGATACTTTTCAATTTGAAGATCTAGTAAAAC
AAAGATTGAAAATAGTTGAAATGAATCCAGCCTTTCTAGAAAGAAGCGTAAATGAGGGTTTTTCTGGCGGAGAGAAAAAA
CGAAACGAGATTCTTCAAATGGCTCTTCTTGAACCCGTCATATCAATACTCGATGAAACTGACTCAGGACTTGATATAGA
TGCTCTTAGGATTGTTGCATCTGGGATCAATAGACTCTCGCAACCAAATTCGGCAACAATTTTAATCACCCATTATCAAA
GACTGCTCAATGAAATCACTCCTGACTTTGTCCACATAATGGCTGATGGAAAAATAATAAAAACTGGCAACAAAGAACTA
GCAATTGACCTTGAGAAATCAGGATATGACTGTATTGACAAAAATACCAAAGAGAAGGAAATAGCAAAATGA

Upstream 100 bases:

>100_bases
CTGAGGCAGACAAACTTTTAGCTTTAAAATTGGAGGGTTCGGTTGGATAAAAATAAATTAAAACCATACTTTTGCTCTCT
ACAACTTTCTACCTAATTTA

Downstream 100 bases:

>100_bases
AATCATCAACTATTTGCCAAGATTGGCTTGACTCTCTTCCTCTAACTGATGGTTATTTAAAAAACGAACAATCAATAGGA
CGAGAATTTCTCCTAGAGAA

Product: ABC transporter, ATP binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MISSTSETILSIKDLHASVEDQEILHGVNLLVKEGEIHAIMGRNGSGKSTLSKVIAGHPAYKVLSGSIQFKGKNILELEP
EERARIGIFLGFQYPVEIPGVSNLEFLRVATNSRRKELLKSELDTFQFEDLVKQRLKIVEMNPAFLERSVNEGFSGGEKK
RNEILQMALLEPVISILDETDSGLDIDALRIVASGINRLSQPNSATILITHYQRLLNEITPDFVHIMADGKIIKTGNKEL
AIDLEKSGYDCIDKNTKEKEIAK

Sequences:

>Translated_263_residues
MISSTSETILSIKDLHASVEDQEILHGVNLLVKEGEIHAIMGRNGSGKSTLSKVIAGHPAYKVLSGSIQFKGKNILELEP
EERARIGIFLGFQYPVEIPGVSNLEFLRVATNSRRKELLKSELDTFQFEDLVKQRLKIVEMNPAFLERSVNEGFSGGEKK
RNEILQMALLEPVISILDETDSGLDIDALRIVASGINRLSQPNSATILITHYQRLLNEITPDFVHIMADGKIIKTGNKEL
AIDLEKSGYDCIDKNTKEKEIAK
>Mature_263_residues
MISSTSETILSIKDLHASVEDQEILHGVNLLVKEGEIHAIMGRNGSGKSTLSKVIAGHPAYKVLSGSIQFKGKNILELEP
EERARIGIFLGFQYPVEIPGVSNLEFLRVATNSRRKELLKSELDTFQFEDLVKQRLKIVEMNPAFLERSVNEGFSGGEKK
RNEILQMALLEPVISILDETDSGLDIDALRIVASGINRLSQPNSATILITHYQRLLNEITPDFVHIMADGKIIKTGNKEL
AIDLEKSGYDCIDKNTKEKEIAK

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=55.7377049180328, Blast_Score=283, Evalue=7e-78,
Organism=Escherichia coli, GI1787792, Length=245, Percent_Identity=27.3469387755102, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=29.6943231441048, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787500, Length=228, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790525, Length=216, Percent_Identity=28.7037037037037, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=24.3589743589744, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI48994883, Length=243, Percent_Identity=27.9835390946502, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=240, Percent_Identity=30, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=222, Percent_Identity=28.3783783783784, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=253, Percent_Identity=26.8774703557312, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=241, Percent_Identity=28.2157676348548, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29253; Mature: 29253

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSTSETILSIKDLHASVEDQEILHGVNLLVKEGEIHAIMGRNGSGKSTLSKVIAGHPA
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHCCCC
YKVLSGSIQFKGKNILELEPEERARIGIFLGFQYPVEIPGVSNLEFLRVATNSRRKELLK
HHEEECEEEECCCCEEEECCCCCCEEEEEEEEECCEECCCCCCCEEEEEHHCHHHHHHHH
SELDTFQFEDLVKQRLKIVEMNPAFLERSVNEGFSGGEKKRNEILQMALLEPVISILDET
HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DSGLDIDALRIVASGINRLSQPNSATILITHYQRLLNEITPDFVHIMADGKIIKTGNKEL
CCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHHHEEEEECCEEEEECCCEE
AIDLEKSGYDCIDKNTKEKEIAK
EEEECCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MISSTSETILSIKDLHASVEDQEILHGVNLLVKEGEIHAIMGRNGSGKSTLSKVIAGHPA
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHCCCC
YKVLSGSIQFKGKNILELEPEERARIGIFLGFQYPVEIPGVSNLEFLRVATNSRRKELLK
HHEEECEEEECCCCEEEECCCCCCEEEEEEEEECCEECCCCCCCEEEEEHHCHHHHHHHH
SELDTFQFEDLVKQRLKIVEMNPAFLERSVNEGFSGGEKKRNEILQMALLEPVISILDET
HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DSGLDIDALRIVASGINRLSQPNSATILITHYQRLLNEITPDFVHIMADGKIIKTGNKEL
CCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHHHEEEEECCEEEEECCCEE
AIDLEKSGYDCIDKNTKEKEIAK
EEEECCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]