| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is hit [C]
Identifier: 124024844
GI number: 124024844
Start: 127668
End: 128003
Strand: Reverse
Name: hit [C]
Synonym: NATL1_01311
Alternate gene names: 124024844
Gene position: 128003-127668 (Counterclockwise)
Preceding gene: 124024845
Following gene: 124024843
Centisome position: 6.86
GC content: 36.01
Gene sequence:
>336_bases ATGACAACAATCTTCGATAAAATTCTTAGCGGTGAAATTCCATGTGATGAGGTTTTTAGTGATAACAAATGCCTAGCTTT CAAAGATATAACCCCTCAAGCACCTACTCACATTTTAATAATTCCTAGAAAACCTATTCCAAGTCTGCAAGATATAAAAA AAGAAGATCAAGAATTACTTGGGCATTTACTGCTAAAAGGGACCGAAATTGCTAATGCTGCTGGTTTAGAAAGTTGGAGA ACCATAATTAATACAGGAGAAGAAGCAGGTCAAACAGTCTTTCACTTACATATTCATATCATTGGCGGAAGGAAGTTAAG TTGGCCACCTGGATAA
Upstream 100 bases:
>100_bases GCGAAGCGATGTAATAAAAGCAACGAATTGAAAAAATCTTGTCAATTCAAGCTATAAAAAATCGCATTAGATTCTTCTTA TTGCTCTCTACACAAATTCA
Downstream 100 bases:
>100_bases ATAATTCATTTCTTTTGATCAATCAGCACGATTGCCTTACTGGCTTAGTTGCTGACTCATTTCCACCCATTGATGCGCTA TAAGGTAGTTAAATAATCTT
Product: HIT (histidine triad) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTTIFDKILSGEIPCDEVFSDNKCLAFKDITPQAPTHILIIPRKPIPSLQDIKKEDQELLGHLLLKGTEIANAAGLESWR TIINTGEEAGQTVFHLHIHIIGGRKLSWPPG
Sequences:
>Translated_111_residues MTTIFDKILSGEIPCDEVFSDNKCLAFKDITPQAPTHILIIPRKPIPSLQDIKKEDQELLGHLLLKGTEIANAAGLESWR TIINTGEEAGQTVFHLHIHIIGGRKLSWPPG >Mature_110_residues TTIFDKILSGEIPCDEVFSDNKCLAFKDITPQAPTHILIIPRKPIPSLQDIKKEDQELLGHLLLKGTEIANAAGLESWRT IINTGEEAGQTVFHLHIHIIGGRKLSWPPG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=51.8181818181818, Blast_Score=135, Evalue=8e-33, Organism=Homo sapiens, GI4885413, Length=110, Percent_Identity=48.1818181818182, Blast_Score=125, Evalue=8e-30, Organism=Escherichia coli, GI1787346, Length=106, Percent_Identity=46.2264150943396, Blast_Score=91, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17506713, Length=110, Percent_Identity=42.7272727272727, Blast_Score=117, Evalue=1e-27, Organism=Drosophila melanogaster, GI28574010, Length=110, Percent_Identity=52.7272727272727, Blast_Score=134, Evalue=2e-32, Organism=Drosophila melanogaster, GI24581222, Length=110, Percent_Identity=52.7272727272727, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 12289; Mature: 12158
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIFDKILSGEIPCDEVFSDNKCLAFKDITPQAPTHILIIPRKPIPSLQDIKKEDQELL CCHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH GHLLLKGTEIANAAGLESWRTIINTGEEAGQTVFHLHIHIIGGRKLSWPPG HHHHHCCCCCCCCCCHHHHHHHHHCCHHCCCEEEEEEEEEECCCCCCCCCC >Mature Secondary Structure TTIFDKILSGEIPCDEVFSDNKCLAFKDITPQAPTHILIIPRKPIPSLQDIKKEDQELL CHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH GHLLLKGTEIANAAGLESWRTIINTGEEAGQTVFHLHIHIIGGRKLSWPPG HHHHHCCCCCCCCCCHHHHHHHHHCCHHCCCEEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]