Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024836

Identifier: 124024836

GI number: 124024836

Start: 120436

End: 121713

Strand: Reverse

Name: 124024836

Synonym: NATL1_01231

Alternate gene names: NA

Gene position: 121713-120436 (Counterclockwise)

Preceding gene: 124024838

Following gene: 124024831

Centisome position: 6.53

GC content: 33.33

Gene sequence:

>1278_bases
ATGAGTCATAATCATTTAGCAATTATTTTTGTCTCAAATGGACCGGGTGAACTAGCTACTTGGGTGAATCCACTTGCTAA
AGAGCTTCATAAACAAATAAAGCTAAAACCAAGAGTACATAGTTCTTCAAAATCTTTAAATTTGGTACTTGTTCCATGCC
CTAATGCAACTGGTAATGAAATTATTGCTGCCAAAAAATGGTTCCAATTTGAAAAAATAATAAAAGCAAAAAATTTCTGG
AAGCTTCTTTTAAACCCTAAAAAATTTGGTTCATGGCCATCCAACGGGTTAGTAATTTTTTTAGGAGGAGATCAATTTTG
GAGCGTTCTACTTTCAGCAAGATTGGGATATTTACATATGACATATGCCGAGTGGATCGCCAGATGGCCTTTTTGGAATA
ATAGAATTGTTGCAATGTCCGAAAGGATTGTTGATAAATTACCAAAACGAATTCAACCTCGTTGTTCAGTCATAGGAGAC
CTAACCGCTGACTTAACTGAAACTGCAAAAATTGATAATCCACTCCCCTCTGGAAAGTGGATTGCACTACTACCAGGTTC
AAAAAGTTCGAAACTAAAAATTGGAATTCCATTCTTTCTTGAAGTAGCAGATAAAATATCAAAATCAATGCCAGATTGTC
AGTTTCTAATACCTCTTGCTCCTACCACAAATATCAATGAACTTAAATACTTTAGTAGTAGCAAAAATCCAATTTCAAAA
CAATATAAATCTGGAATAAAATCAATTACAAAAGCCAATAAAAAAGAAGGAAGAGGAATATTGATAACTAATAATTCTAC
AGTCATTTTAATACAAGAAAAGCATCCAGCATATAGTGATCTAAGCCAGTGTGATATCGCACTAACAACAGTAGGAGCAA
ATACTGCTGAGCTTGGATCATTAAATATTCCAATGATAGTTGTTGTTCCTACACAACACATTTCAGTCATGGAAGCATGG
GATGGATTTATAGGTTTAATAGCTAGATTGCCAATATTAAAATGGTGCATAGGACTATTAATTAGCTTTATAAAACTGAA
GAAAAGAGGATATATGGCTTGGCCAAATATATATGCAAAAAAGATGATTGTCCCAGAAAGAGTTGGACATATAACCCCTG
CCCAAATAGCTGAAGAAACTATTGATTGGCTAAATTCACCTACAAGGCTATCTGGCCAAAAAGAAGATTTACAATTACTA
AGGGGTAGTAAAGGAGCAGTAAAAAAATTTTGCTATCAAATTATTAATCTTCTTGAAGAAAAAAAGCTTTTAAATTAA

Upstream 100 bases:

>100_bases
GCGGAATTGGTATACGCGCATGTCTAAGGAACATGTGGCTTCGGCCTTGCGAGTTCAAGTCTCGCCATCCGCATTATTCA
ATACTGATGCTCATCAATAA

Downstream 100 bases:

>100_bases
TTACCATGGATCTTCAATATCTATTAGTTCTTTATCATTAGATATCATATCTTGAGAATTATTTGTCGTTAAATCTTCTA
AGGGTTCGACATCAATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSHNHLAIIFVSNGPGELATWVNPLAKELHKQIKLKPRVHSSSKSLNLVLVPCPNATGNEIIAAKKWFQFEKIIKAKNFW
KLLLNPKKFGSWPSNGLVIFLGGDQFWSVLLSARLGYLHMTYAEWIARWPFWNNRIVAMSERIVDKLPKRIQPRCSVIGD
LTADLTETAKIDNPLPSGKWIALLPGSKSSKLKIGIPFFLEVADKISKSMPDCQFLIPLAPTTNINELKYFSSSKNPISK
QYKSGIKSITKANKKEGRGILITNNSTVILIQEKHPAYSDLSQCDIALTTVGANTAELGSLNIPMIVVVPTQHISVMEAW
DGFIGLIARLPILKWCIGLLISFIKLKKRGYMAWPNIYAKKMIVPERVGHITPAQIAEETIDWLNSPTRLSGQKEDLQLL
RGSKGAVKKFCYQIINLLEEKKLLN

Sequences:

>Translated_425_residues
MSHNHLAIIFVSNGPGELATWVNPLAKELHKQIKLKPRVHSSSKSLNLVLVPCPNATGNEIIAAKKWFQFEKIIKAKNFW
KLLLNPKKFGSWPSNGLVIFLGGDQFWSVLLSARLGYLHMTYAEWIARWPFWNNRIVAMSERIVDKLPKRIQPRCSVIGD
LTADLTETAKIDNPLPSGKWIALLPGSKSSKLKIGIPFFLEVADKISKSMPDCQFLIPLAPTTNINELKYFSSSKNPISK
QYKSGIKSITKANKKEGRGILITNNSTVILIQEKHPAYSDLSQCDIALTTVGANTAELGSLNIPMIVVVPTQHISVMEAW
DGFIGLIARLPILKWCIGLLISFIKLKKRGYMAWPNIYAKKMIVPERVGHITPAQIAEETIDWLNSPTRLSGQKEDLQLL
RGSKGAVKKFCYQIINLLEEKKLLN
>Mature_424_residues
SHNHLAIIFVSNGPGELATWVNPLAKELHKQIKLKPRVHSSSKSLNLVLVPCPNATGNEIIAAKKWFQFEKIIKAKNFWK
LLLNPKKFGSWPSNGLVIFLGGDQFWSVLLSARLGYLHMTYAEWIARWPFWNNRIVAMSERIVDKLPKRIQPRCSVIGDL
TADLTETAKIDNPLPSGKWIALLPGSKSSKLKIGIPFFLEVADKISKSMPDCQFLIPLAPTTNINELKYFSSSKNPISKQ
YKSGIKSITKANKKEGRGILITNNSTVILIQEKHPAYSDLSQCDIALTTVGANTAELGSLNIPMIVVVPTQHISVMEAWD
GFIGLIARLPILKWCIGLLISFIKLKKRGYMAWPNIYAKKMIVPERVGHITPAQIAEETIDWLNSPTRLSGQKEDLQLLR
GSKGAVKKFCYQIINLLEEKKLLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47640; Mature: 47509

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNHLAIIFVSNGPGELATWVNPLAKELHKQIKLKPRVHSSSKSLNLVLVPCPNATGNE
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC
IIAAKKWFQFEKIIKAKNFWKLLLNPKKFGSWPSNGLVIFLGGDQFWSVLLSARLGYLHM
EEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH
TYAEWIARWPFWNNRIVAMSERIVDKLPKRIQPRCSVIGDLTADLTETAKIDNPLPSGKW
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCE
IALLPGSKSSKLKIGIPFFLEVADKISKSMPDCQFLIPLAPTTNINELKYFSSSKNPISK
EEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHH
QYKSGIKSITKANKKEGRGILITNNSTVILIQEKHPAYSDLSQCDIALTTVGANTAELGS
HHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCHHHCCEEEEEECCCCCCCCC
LNIPMIVVVPTQHISVMEAWDGFIGLIARLPILKWCIGLLISFIKLKKRGYMAWPNIYAK
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
KMIVPERVGHITPAQIAEETIDWLNSPTRLSGQKEDLQLLRGSKGAVKKFCYQIINLLEE
HEECHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
KKLLN
HHCCC
>Mature Secondary Structure 
SHNHLAIIFVSNGPGELATWVNPLAKELHKQIKLKPRVHSSSKSLNLVLVPCPNATGNE
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC
IIAAKKWFQFEKIIKAKNFWKLLLNPKKFGSWPSNGLVIFLGGDQFWSVLLSARLGYLHM
EEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH
TYAEWIARWPFWNNRIVAMSERIVDKLPKRIQPRCSVIGDLTADLTETAKIDNPLPSGKW
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCE
IALLPGSKSSKLKIGIPFFLEVADKISKSMPDCQFLIPLAPTTNINELKYFSSSKNPISK
EEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHH
QYKSGIKSITKANKKEGRGILITNNSTVILIQEKHPAYSDLSQCDIALTTVGANTAELGS
HHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCHHHCCEEEEEECCCCCCCCC
LNIPMIVVVPTQHISVMEAWDGFIGLIARLPILKWCIGLLISFIKLKKRGYMAWPNIYAK
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
KMIVPERVGHITPAQIAEETIDWLNSPTRLSGQKEDLQLLRGSKGAVKKFCYQIINLLEE
HEECHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
KKLLN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA