| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024833
Identifier: 124024833
GI number: 124024833
Start: 115265
End: 115654
Strand: Direct
Name: 124024833
Synonym: NATL1_01201
Alternate gene names: NA
Gene position: 115265-115654 (Clockwise)
Preceding gene: 124024832
Following gene: 124024834
Centisome position: 6.18
GC content: 33.33
Gene sequence:
>390_bases TTGAGTAATCTTGGCGAAAAAAAAGTTTATAGGTGGGTTTTGTTAAAACACATTGGATCGCCCGATGACATCAAGGGTAT CCATTTTGATTTGCTTTTAGAAGATAAAGAACTTTGCAGAACTTGGCGCTTGATTGATATTCCATTATTGGATGGGCCTT ATGTGGATTCAGTTTTTATTGCACCTCATAATCTTTACTGGCTTGATATTGAAGAAAAGGTTGTTTCAGGCAATAGAGGA GTTGCAACTAGAATTAAAAAAGGCATCTTTTTACAATCACTACCATCTATTGATAATGGTTTTTTAAATTTATCTATACA GTGGGAGGGTGTTGAAAGTCATTTGGTTATAGATAAATATGGCTGTAGGATTTTTAGCAAAAGATATTAA
Upstream 100 bases:
>100_bases GCTGAAAAATTGATTGTTAAGCAGTTTCTATTGAGGGGATATTTATCTCCTGATTAGTTCTTTATGGAAATTTCCTGATT AGTTTTTTAATATTTTTCAA
Downstream 100 bases:
>100_bases TTATTTCTTGTGAATTAGAAGGGCTTGAGTTTTTCTTATATTTCGCTAACGTCATTCTTATTGTGGATGGGTTCTGTTGG TCCATATCAACCACGTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSNLGEKKVYRWVLLKHIGSPDDIKGIHFDLLLEDKELCRTWRLIDIPLLDGPYVDSVFIAPHNLYWLDIEEKVVSGNRG VATRIKKGIFLQSLPSIDNGFLNLSIQWEGVESHLVIDKYGCRIFSKRY
Sequences:
>Translated_129_residues MSNLGEKKVYRWVLLKHIGSPDDIKGIHFDLLLEDKELCRTWRLIDIPLLDGPYVDSVFIAPHNLYWLDIEEKVVSGNRG VATRIKKGIFLQSLPSIDNGFLNLSIQWEGVESHLVIDKYGCRIFSKRY >Mature_128_residues SNLGEKKVYRWVLLKHIGSPDDIKGIHFDLLLEDKELCRTWRLIDIPLLDGPYVDSVFIAPHNLYWLDIEEKVVSGNRGV ATRIKKGIFLQSLPSIDNGFLNLSIQWEGVESHLVIDKYGCRIFSKRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14929; Mature: 14797
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLGEKKVYRWVLLKHIGSPDDIKGIHFDLLLEDKELCRTWRLIDIPLLDGPYVDSVFI CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHEEEEEEEECCCCCCCEEEE APHNLYWLDIEEKVVSGNRGVATRIKKGIFLQSLPSIDNGFLNLSIQWEGVESHLVIDKY CCCCEEEEEEHHHHHCCCCCHHHHHHCCEEEECCCCCCCCEEEEEEEECCCCCEEEEECC GCRIFSKRY CCEEEECCC >Mature Secondary Structure SNLGEKKVYRWVLLKHIGSPDDIKGIHFDLLLEDKELCRTWRLIDIPLLDGPYVDSVFI CCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHEEEEEEEECCCCCCCEEEE APHNLYWLDIEEKVVSGNRGVATRIKKGIFLQSLPSIDNGFLNLSIQWEGVESHLVIDKY CCCCEEEEEEHHHHHCCCCCHHHHHHCCEEEECCCCCCCCEEEEEEEECCCCCEEEEECC GCRIFSKRY CCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA