| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024805
Identifier: 124024805
GI number: 124024805
Start: 93949
End: 94284
Strand: Reverse
Name: 124024805
Synonym: NATL1_00921
Alternate gene names: NA
Gene position: 94284-93949 (Counterclockwise)
Preceding gene: 124024806
Following gene: 124024804
Centisome position: 5.06
GC content: 32.44
Gene sequence:
>336_bases ATGACTCCTGATCTGCCAATTATTCCTACTTCAAAAATAAAAAAGAAAAAACTAGAAAAAACTAGAATTCATAAATGGAC TCTTTTTTCTCTTTGTTTTATAACTACTCTAGTAGTCGTTAGTTTGATTAAAGCGTATCTTCCATTGCTTGTGTCCGCAC TTGCGATGCTTTTTGTATGGAGTCAAATGACCAAACCAATAGCAGAGATAGAAACTAAATCTACGAATGATGACACTAAC CAGTTAGATTTATTCCATAGGCAATACAAAATTGGCAGAAAATACTCCAAGATCACAAGAGAATTACATGAAAAGAAAGA TTCCAAAGTTGCATAA
Upstream 100 bases:
>100_bases CGTATGTATCAGATAAAGCTAATTTAAAAACAGATATTATTACAGCAGATCAAATAATTACTACATCCTCTAATCCAATA CACCTACAACTCAATTACGA
Downstream 100 bases:
>100_bases ACTTGATCGCTTTAAGAAAAAATTGAAACCAACTATTACATTTACTCTTAAGAATACGATAGAAGAAGTGATCAGGTTAT GAATTATCTATTACTTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTPDLPIIPTSKIKKKKLEKTRIHKWTLFSLCFITTLVVVSLIKAYLPLLVSALAMLFVWSQMTKPIAEIETKSTNDDTN QLDLFHRQYKIGRKYSKITRELHEKKDSKVA
Sequences:
>Translated_111_residues MTPDLPIIPTSKIKKKKLEKTRIHKWTLFSLCFITTLVVVSLIKAYLPLLVSALAMLFVWSQMTKPIAEIETKSTNDDTN QLDLFHRQYKIGRKYSKITRELHEKKDSKVA >Mature_110_residues TPDLPIIPTSKIKKKKLEKTRIHKWTLFSLCFITTLVVVSLIKAYLPLLVSALAMLFVWSQMTKPIAEIETKSTNDDTNQ LDLFHRQYKIGRKYSKITRELHEKKDSKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12904; Mature: 12772
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDLPIIPTSKIKKKKLEKTRIHKWTLFSLCFITTLVVVSLIKAYLPLLVSALAMLFVW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQMTKPIAEIETKSTNDDTNQLDLFHRQYKIGRKYSKITRELHEKKDSKVA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPDLPIIPTSKIKKKKLEKTRIHKWTLFSLCFITTLVVVSLIKAYLPLLVSALAMLFVW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQMTKPIAEIETKSTNDDTNQLDLFHRQYKIGRKYSKITRELHEKKDSKVA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA