| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024796
Identifier: 124024796
GI number: 124024796
Start: 83844
End: 85352
Strand: Reverse
Name: 124024796
Synonym: NATL1_00831
Alternate gene names: NA
Gene position: 85352-83844 (Counterclockwise)
Preceding gene: 124024797
Following gene: 124024795
Centisome position: 4.58
GC content: 37.44
Gene sequence:
>1509_bases ATGACTTGGTCTCTTGCAAATATTGAACAACTGAGTGTGAGTGGAACAAACGCTTTAGGTGTAAGTTCTCATTTGGAAAT AAATCAAGGCGATAGTAATGACAAATATCAGCTTTATTACACAGGTGATGGAGGAGTCACTGTCAATAGTATGTCTACTG ATCTTGAGCTTACTAAGCAGGGAGAAATTAAATTAATTCAAGATCTCACAATCATTACTACTAATGAAGGTATACGTAGG GCTTATTATGTAGAAGTTGATCCGAATACCGGCAATCATGAAATTCTTACTGCATTGCTATCAGAGGATGGATTAACTCT TTCACAAGCCACTAGAACAGGAATATTAGACAACGGAGACAACGCTTGGGGAGTTCCTGACTCAGTAGTTCTTCCAGATG GAAGAATCAGAATATACTGGGTTAGTACAGATAATACAGATTCTGAATGGACCGTTCCACAAGATGATGAAATTATAAAA AATGATGGTTTTAAGACCCCAAATGGAGAATGGGTCTCGGCAAATGAATATTTTGAAAACGACAGAAAAATACCTGATAG TGCAACTAAAACACTTGCTAATGAAGTGATACTTAGTGCAACTTCTGATACATCAAAGGGTACAGAATTTACTGTAGATG AGGGCTATAGGACTGAAGGAGGGTATGTCGACTTTGAGGTTTTAAAAGCTAAAGAAAATGATTGGTTAGCGATAATGTCT TCTTCGCCAGTAACGATCCCTGATGAACCTCAGGGCATTTATATAGGAATTTCAAGTGATGGCCTTAGTTGGGAAATAGA TGATAATAATTTAGCTCCTCTTGAAAGGAGTTATCTCGATCCTACAGGACTCTTATTATCTAATACACCCAATAAATATC AGATTGTCATGAGCTCATCGCTATCAATACTTGGCGATAGAGAATATACATTAGTAACAGCTGAGCTTACATCAGCTACT ACCACATATTTAGGCAATAGCTTTGATTATAATTTCTTTAATATTGGTAATGGAGTATATGGAATAAGACCAGATTCTAC TGGAACTATCGATTCATTGACTGGAATTTCAAATATTCAATTCGATGATAAAAAACTAAACATCACATCTGATATTAAAG CGACATTTGATCAGGTCACAGGTTTAAATACAGACTCAGGTGAGATGTTCCGTCTCTATAACGCTGCTTTCGCACGCTTC CCTGATGCTGATGGTTTGAAGTATTGGATTGAGCAATTTAGTTCTGGGAAAAATACAAGACGAGTTGTTGCTCAATCTTT TTTAGGTTCTGCAGAGTTCACTGAGAAATATGGAAGCAATGTAAGTGATGAGACATACGTGAATAACCTCTATAAAAATG TCCTTGGAAGAGACGCTGATGCAGAGGGGCTTAACTACTGGGTAGGCAATCTCAGTAATGGAATTGAAACTCGATACGAA GCGCTCCTAGGGTTTTCAGAGTCAGAAGAGAACAAAGCGCTCTTTACAGAAATGACAGGTTTTGGATAA
Upstream 100 bases:
>100_bases GTCGACTAGTATCTTGACGCTTAAGAGTTGTAAATTGATATGCATTATAGGAATCTATATGAGCTAGTATTGTTATGAAA GATTGGAATCAATTTTTATA
Downstream 100 bases:
>100_bases CGAACGAAGAACTTCTTACTACTTTTTTTAACAGCTGGTTTCCTCTTGCCTCCTCCATTACAATCGGACACCAATCACCT TGGTGCAGGAGGAATATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MTWSLANIEQLSVSGTNALGVSSHLEINQGDSNDKYQLYYTGDGGVTVNSMSTDLELTKQGEIKLIQDLTIITTNEGIRR AYYVEVDPNTGNHEILTALLSEDGLTLSQATRTGILDNGDNAWGVPDSVVLPDGRIRIYWVSTDNTDSEWTVPQDDEIIK NDGFKTPNGEWVSANEYFENDRKIPDSATKTLANEVILSATSDTSKGTEFTVDEGYRTEGGYVDFEVLKAKENDWLAIMS SSPVTIPDEPQGIYIGISSDGLSWEIDDNNLAPLERSYLDPTGLLLSNTPNKYQIVMSSSLSILGDREYTLVTAELTSAT TTYLGNSFDYNFFNIGNGVYGIRPDSTGTIDSLTGISNIQFDDKKLNITSDIKATFDQVTGLNTDSGEMFRLYNAAFARF PDADGLKYWIEQFSSGKNTRRVVAQSFLGSAEFTEKYGSNVSDETYVNNLYKNVLGRDADAEGLNYWVGNLSNGIETRYE ALLGFSESEENKALFTEMTGFG
Sequences:
>Translated_502_residues MTWSLANIEQLSVSGTNALGVSSHLEINQGDSNDKYQLYYTGDGGVTVNSMSTDLELTKQGEIKLIQDLTIITTNEGIRR AYYVEVDPNTGNHEILTALLSEDGLTLSQATRTGILDNGDNAWGVPDSVVLPDGRIRIYWVSTDNTDSEWTVPQDDEIIK NDGFKTPNGEWVSANEYFENDRKIPDSATKTLANEVILSATSDTSKGTEFTVDEGYRTEGGYVDFEVLKAKENDWLAIMS SSPVTIPDEPQGIYIGISSDGLSWEIDDNNLAPLERSYLDPTGLLLSNTPNKYQIVMSSSLSILGDREYTLVTAELTSAT TTYLGNSFDYNFFNIGNGVYGIRPDSTGTIDSLTGISNIQFDDKKLNITSDIKATFDQVTGLNTDSGEMFRLYNAAFARF PDADGLKYWIEQFSSGKNTRRVVAQSFLGSAEFTEKYGSNVSDETYVNNLYKNVLGRDADAEGLNYWVGNLSNGIETRYE ALLGFSESEENKALFTEMTGFG >Mature_501_residues TWSLANIEQLSVSGTNALGVSSHLEINQGDSNDKYQLYYTGDGGVTVNSMSTDLELTKQGEIKLIQDLTIITTNEGIRRA YYVEVDPNTGNHEILTALLSEDGLTLSQATRTGILDNGDNAWGVPDSVVLPDGRIRIYWVSTDNTDSEWTVPQDDEIIKN DGFKTPNGEWVSANEYFENDRKIPDSATKTLANEVILSATSDTSKGTEFTVDEGYRTEGGYVDFEVLKAKENDWLAIMSS SPVTIPDEPQGIYIGISSDGLSWEIDDNNLAPLERSYLDPTGLLLSNTPNKYQIVMSSSLSILGDREYTLVTAELTSATT TYLGNSFDYNFFNIGNGVYGIRPDSTGTIDSLTGISNIQFDDKKLNITSDIKATFDQVTGLNTDSGEMFRLYNAAFARFP DADGLKYWIEQFSSGKNTRRVVAQSFLGSAEFTEKYGSNVSDETYVNNLYKNVLGRDADAEGLNYWVGNLSNGIETRYEA LLGFSESEENKALFTEMTGFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55326; Mature: 55195
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWSLANIEQLSVSGTNALGVSSHLEINQGDSNDKYQLYYTGDGGVTVNSMSTDLELTKQ CCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCEEEECCCCCEEEECC GEIKLIQDLTIITTNEGIRRAYYVEVDPNTGNHEILTALLSEDGLTLSQATRTGILDNGD CCEEEEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHEEHHCCCCEEEHHHCCCCEECCC NAWGVPDSVVLPDGRIRIYWVSTDNTDSEWTVPQDDEIIKNDGFKTPNGEWVSANEYFEN CCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECHHHHCC DRKIPDSATKTLANEVILSATSDTSKGTEFTVDEGYRTEGGYVDFEVLKAKENDWLAIMS CCCCCCHHHHHHHHHEEEEECCCCCCCCEEEECCCEECCCCEEEEEEEEECCCCEEEEEC SSPVTIPDEPQGIYIGISSDGLSWEIDDNNLAPLERSYLDPTGLLLSNTPNKYQIVMSSS CCCEECCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHCCCCCEEECCCCCEEEEEEECC LSILGDREYTLVTAELTSATTTYLGNSFDYNFFNIGNGVYGIRPDSTGTIDSLTGISNIQ EEEECCCCEEEEEEECCCCCHHHCCCCCCCCEEECCCCEEEECCCCCCCHHHHCCCCCCE FDDKKLNITSDIKATFDQVTGLNTDSGEMFRLYNAAFARFPDADGLKYWIEQFSSGKNTR ECCCEEEECHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHCCCHHH RVVAQSFLGSAEFTEKYGSNVSDETYVNNLYKNVLGRDADAEGLNYWVGNLSNGIETRYE HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHH ALLGFSESEENKALFTEMTGFG HHHCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TWSLANIEQLSVSGTNALGVSSHLEINQGDSNDKYQLYYTGDGGVTVNSMSTDLELTKQ CCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCEEEECCCCCEEEECC GEIKLIQDLTIITTNEGIRRAYYVEVDPNTGNHEILTALLSEDGLTLSQATRTGILDNGD CCEEEEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHEEHHCCCCEEEHHHCCCCEECCC NAWGVPDSVVLPDGRIRIYWVSTDNTDSEWTVPQDDEIIKNDGFKTPNGEWVSANEYFEN CCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECHHHHCC DRKIPDSATKTLANEVILSATSDTSKGTEFTVDEGYRTEGGYVDFEVLKAKENDWLAIMS CCCCCCHHHHHHHHHEEEEECCCCCCCCEEEECCCEECCCCEEEEEEEEECCCCEEEEEC SSPVTIPDEPQGIYIGISSDGLSWEIDDNNLAPLERSYLDPTGLLLSNTPNKYQIVMSSS CCCEECCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHCCCCCEEECCCCCEEEEEEECC LSILGDREYTLVTAELTSATTTYLGNSFDYNFFNIGNGVYGIRPDSTGTIDSLTGISNIQ EEEECCCCEEEEEEECCCCCHHHCCCCCCCCEEECCCCEEEECCCCCCCHHHHCCCCCCE FDDKKLNITSDIKATFDQVTGLNTDSGEMFRLYNAAFARFPDADGLKYWIEQFSSGKNTR ECCCEEEECHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHCCCHHH RVVAQSFLGSAEFTEKYGSNVSDETYVNNLYKNVLGRDADAEGLNYWVGNLSNGIETRYE HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHH ALLGFSESEENKALFTEMTGFG HHHCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA