| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024765
Identifier: 124024765
GI number: 124024765
Start: 54398
End: 55009
Strand: Direct
Name: 124024765
Synonym: NATL1_00521
Alternate gene names: NA
Gene position: 54398-55009 (Clockwise)
Preceding gene: 124024761
Following gene: 124024766
Centisome position: 2.92
GC content: 37.75
Gene sequence:
>612_bases TTGACAGTTGCACATCAGACTGATTCGCATTTAAGCCGACGGCTGCAGAAGGATAGTATTACTATCTCAGGAAAGGTTAT TTACATTAATCCTTTTCTTTATTGGAGACGCTTCGACAACAATACTGACAGATGGTTGAGAGAGCCTGGTCAACTAACAG AGGAGCAGATTAATCTCAATAGAGCTCGTTTTTATCCTGAGGTTGAGTGGACTTTTCTCAGAGACGAAGAGCGGGTTATT AAAGACGCGGCAGTTGAAATGTTTTTAAAGACGCTTGAATTAATAAGTACTTTTCACCCTCATCTGACTGCGGGGCAATT ATTAGAAGTAGAGAGAAAAATGGCAGTAACTAAAAAGAAGTCTTTTGAACGTTGGGTAGAAAAATCTTTTAGGAAAAAAA TTAATCAAGCTTCAAAAGAGCGCAATAGGTTTGCTAGAGAACGTTTGATAAGAGGTTGGAAAGAATGGTTAACTCTTGAA ACTACTCATCAAGCTTTTTTGCCATTCGCAGCAATAATTGTGATATCGATCTTTGCTGGTTGGTCCATAGGTATTTCTAA TAATAGTTGTACACCTTACTTTCCAACGACAGAAACAGGTATTCTTAAGTAA
Upstream 100 bases:
>100_bases GAAGTTAGATCAATTTGAGGATTCCTAAGTTGAACAATCTTGTTCGGGGGGTGGTCTACTTCAAAAAAAAAAGATAACTT AGTTCAATGGCCTATTACTT
Downstream 100 bases:
>100_bases CACGAATAAAGCCATTATGGCTAAAGATCAATTAAGGGATTTCCATTTATTTGCAATGGAGTCTGCTTTGCCATTTGGTA TTGGCATTATTAAAAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTVAHQTDSHLSRRLQKDSITISGKVIYINPFLYWRRFDNNTDRWLREPGQLTEEQINLNRARFYPEVEWTFLRDEERVI KDAAVEMFLKTLELISTFHPHLTAGQLLEVERKMAVTKKKSFERWVEKSFRKKINQASKERNRFARERLIRGWKEWLTLE TTHQAFLPFAAIIVISIFAGWSIGISNNSCTPYFPTTETGILK
Sequences:
>Translated_203_residues MTVAHQTDSHLSRRLQKDSITISGKVIYINPFLYWRRFDNNTDRWLREPGQLTEEQINLNRARFYPEVEWTFLRDEERVI KDAAVEMFLKTLELISTFHPHLTAGQLLEVERKMAVTKKKSFERWVEKSFRKKINQASKERNRFARERLIRGWKEWLTLE TTHQAFLPFAAIIVISIFAGWSIGISNNSCTPYFPTTETGILK >Mature_202_residues TVAHQTDSHLSRRLQKDSITISGKVIYINPFLYWRRFDNNTDRWLREPGQLTEEQINLNRARFYPEVEWTFLRDEERVIK DAAVEMFLKTLELISTFHPHLTAGQLLEVERKMAVTKKKSFERWVEKSFRKKINQASKERNRFARERLIRGWKEWLTLET THQAFLPFAAIIVISIFAGWSIGISNNSCTPYFPTTETGILK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24050; Mature: 23919
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAHQTDSHLSRRLQKDSITISGKVIYINPFLYWRRFDNNTDRWLREPGQLTEEQINLN CCCCCCHHHHHHHHHHHCCEEECCEEEEECCEEEEEECCCCHHHHHCCCCHHHHHHHCCH RARFYPEVEWTFLRDEERVIKDAAVEMFLKTLELISTFHPHLTAGQLLEVERKMAVTKKK HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SFERWVEKSFRKKINQASKERNRFARERLIRGWKEWLTLETTHQAFLPFAAIIVISIFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WSIGISNNSCTPYFPTTETGILK CEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVAHQTDSHLSRRLQKDSITISGKVIYINPFLYWRRFDNNTDRWLREPGQLTEEQINLN CCCCCHHHHHHHHHHHCCEEECCEEEEECCEEEEEECCCCHHHHHCCCCHHHHHHHCCH RARFYPEVEWTFLRDEERVIKDAAVEMFLKTLELISTFHPHLTAGQLLEVERKMAVTKKK HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SFERWVEKSFRKKINQASKERNRFARERLIRGWKEWLTLETTHQAFLPFAAIIVISIFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WSIGISNNSCTPYFPTTETGILK CEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA