| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is dnaJ [H]
Identifier: 124024729
GI number: 124024729
Start: 19556
End: 20686
Strand: Direct
Name: dnaJ [H]
Synonym: NATL1_00161
Alternate gene names: 124024729
Gene position: 19556-20686 (Clockwise)
Preceding gene: 124024728
Following gene: 124024730
Centisome position: 1.05
GC content: 39.79
Gene sequence:
>1131_bases ATGGCTGATTTTTACGATCTATTGGGTGTCAGCAGAGATGCTGATGCTGACACTTTAAAAAGAGCTTATAGACAGCAAGC TCGGAAATATCACCCTGACGTCAATAAGGAAGCAGGTGCAGAGGATAAGTTCAAAGAAATAGGCAAAGCATATGAAGTTT TAAGCGACTCTCAAAAGCGAGCTCGTTACGACCAATTTGGAGAAGCTGGAATAGGTGGGGCCGCTGGCATGCCGGATATG GGAGATATGGGTGGCTTTGCAGATCTGTTTGATACCTTTTTTAATGGCTTTGGTGGTGCTAGTTCAGCTGGAGGTTCTCG CCCTCAAAGACGCGGACCACAACAGGGAGACGATTTACGTTACGACCTAACGATTGATTTTGATAAAGCTATTTTTGGAC AAGAAAAAGAGATTACGGTCCCTCATTTAGAAACTTGTGATGTTTGCAGAGGCACTGGGGCTAAGAAAGGCACTGGTCCT GTTACTTGTTCTACATGTAGTGGTGCAGGTCAAGTAAGGAGAGCGACTCGTACACCTTTTGGAAGTTTTACTCAAGTAGC TGAATGCCCAACCTGTGGTGGTACTGGACAAGTGATTAAAGATCCTTGCAACGCTTGTGGAGGGAAAGGCGTTAAACAAG TAAGAAAAAAATTAAAAATTAATATTCCTGCTGGAGTTGATAGCGGAACACGATTAAGAGTTTCAGGAGAGGGTAATGCT GGATTAAAGGGTGGTCCATCTGGAGATCTATATGTTTTTTTAAAAGTTAAAAATCATCCTAATTTAAAGAGAGATGGATT GACAATTTTATCTGAGGTTAATATTAGTTACCTTCAGGCAATTTTAGGAGATACTATTGAAATAGAGACTGTAGATGGCC CTACTAAGTTGCAAATTCCAGCAGGGACCCAACCTAACTCTATTTTGAATTTAGAAAATAAAGGAGTGCCAAAACTAGGC AATCCAGTTGCTAGAGGTAATCATCAAGTCTCAGTAAAGATTAAATTACCTACAAAATTATCAGATTCTGAAAGAAATTT ATTAGAAGAATTAGCTGGACATTACTCTGCACTTGGACCACAACATCATTATCATAAAAGTGGCTTATTTAGTAAGTTAT TTGGCAAATAA
Upstream 100 bases:
>100_bases CTTCTAATCAAGAACTAAGTGAATCTGTAGATGGTCCAACTAAAGATGAGAATTAACTACATGATGATCGAAACGGAATT GAATTTGTTTTAATGTACTA
Downstream 100 bases:
>100_bases TAGTGGAGAAAAATATCTTCATTGATCATTATTTAGATTTGAGTGGCCTTGCTTGCCCAGTCAATTTTGTTAAATGTTGT CTGGTTTTAGAAAACTTATC
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MADFYDLLGVSRDADADTLKRAYRQQARKYHPDVNKEAGAEDKFKEIGKAYEVLSDSQKRARYDQFGEAGIGGAAGMPDM GDMGGFADLFDTFFNGFGGASSAGGSRPQRRGPQQGDDLRYDLTIDFDKAIFGQEKEITVPHLETCDVCRGTGAKKGTGP VTCSTCSGAGQVRRATRTPFGSFTQVAECPTCGGTGQVIKDPCNACGGKGVKQVRKKLKINIPAGVDSGTRLRVSGEGNA GLKGGPSGDLYVFLKVKNHPNLKRDGLTILSEVNISYLQAILGDTIEIETVDGPTKLQIPAGTQPNSILNLENKGVPKLG NPVARGNHQVSVKIKLPTKLSDSERNLLEELAGHYSALGPQHHYHKSGLFSKLFGK
Sequences:
>Translated_376_residues MADFYDLLGVSRDADADTLKRAYRQQARKYHPDVNKEAGAEDKFKEIGKAYEVLSDSQKRARYDQFGEAGIGGAAGMPDM GDMGGFADLFDTFFNGFGGASSAGGSRPQRRGPQQGDDLRYDLTIDFDKAIFGQEKEITVPHLETCDVCRGTGAKKGTGP VTCSTCSGAGQVRRATRTPFGSFTQVAECPTCGGTGQVIKDPCNACGGKGVKQVRKKLKINIPAGVDSGTRLRVSGEGNA GLKGGPSGDLYVFLKVKNHPNLKRDGLTILSEVNISYLQAILGDTIEIETVDGPTKLQIPAGTQPNSILNLENKGVPKLG NPVARGNHQVSVKIKLPTKLSDSERNLLEELAGHYSALGPQHHYHKSGLFSKLFGK >Mature_375_residues ADFYDLLGVSRDADADTLKRAYRQQARKYHPDVNKEAGAEDKFKEIGKAYEVLSDSQKRARYDQFGEAGIGGAAGMPDMG DMGGFADLFDTFFNGFGGASSAGGSRPQRRGPQQGDDLRYDLTIDFDKAIFGQEKEITVPHLETCDVCRGTGAKKGTGPV TCSTCSGAGQVRRATRTPFGSFTQVAECPTCGGTGQVIKDPCNACGGKGVKQVRKKLKINIPAGVDSGTRLRVSGEGNAG LKGGPSGDLYVFLKVKNHPNLKRDGLTILSEVNISYLQAILGDTIEIETVDGPTKLQIPAGTQPNSILNLENKGVPKLGN PVARGNHQVSVKIKLPTKLSDSERNLLEELAGHYSALGPQHHYHKSGLFSKLFGK
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360838, Length=358, Percent_Identity=34.6368715083799, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI205360840, Length=358, Percent_Identity=34.6368715083799, Blast_Score=198, Evalue=6e-51, Organism=Homo sapiens, GI4504511, Length=359, Percent_Identity=32.3119777158774, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI5031741, Length=341, Percent_Identity=31.9648093841642, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI194328760, Length=365, Percent_Identity=29.041095890411, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI194328758, Length=365, Percent_Identity=29.041095890411, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI7706495, Length=353, Percent_Identity=29.4617563739377, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI194328762, Length=332, Percent_Identity=26.8072289156627, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI201862518, Length=69, Percent_Identity=57.9710144927536, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=57.9710144927536, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=57.9710144927536, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI5453690, Length=66, Percent_Identity=59.0909090909091, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI6631085, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=57.3529411764706, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI194306642, Length=101, Percent_Identity=47.5247524752475, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI194306640, Length=101, Percent_Identity=47.5247524752475, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI27151736, Length=86, Percent_Identity=46.5116279069767, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI88501736, Length=86, Percent_Identity=46.5116279069767, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI47777312, Length=106, Percent_Identity=45.2830188679245, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI22749377, Length=103, Percent_Identity=42.7184466019417, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI9558755, Length=198, Percent_Identity=31.3131313131313, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI21553335, Length=87, Percent_Identity=44.8275862068966, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI17388799, Length=68, Percent_Identity=51.4705882352941, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=51.4705882352941, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI39204547, Length=160, Percent_Identity=32.5, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI72534740, Length=65, Percent_Identity=52.3076923076923, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI23503241, Length=106, Percent_Identity=42.4528301886792, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI68077168, Length=71, Percent_Identity=52.112676056338, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI68077166, Length=71, Percent_Identity=52.112676056338, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI45504382, Length=69, Percent_Identity=44.9275362318841, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1786197, Length=371, Percent_Identity=43.1266846361186, Blast_Score=281, Evalue=3e-77, Organism=Escherichia coli, GI1787235, Length=370, Percent_Identity=27.027027027027, Blast_Score=121, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17553096, Length=364, Percent_Identity=31.8681318681319, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17553098, Length=364, Percent_Identity=31.8681318681319, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17507263, Length=360, Percent_Identity=31.6666666666667, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI212645553, Length=352, Percent_Identity=29.5454545454545, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17563890, Length=357, Percent_Identity=27.7310924369748, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17534355, Length=69, Percent_Identity=62.3188405797101, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI115532378, Length=70, Percent_Identity=52.8571428571429, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17554644, Length=97, Percent_Identity=42.2680412371134, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=50.7692307692308, Blast_Score=72, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6324265, Length=364, Percent_Identity=36.5384615384615, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321094, Length=393, Percent_Identity=33.3333333333333, Blast_Score=151, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323870, Length=364, Percent_Identity=31.5934065934066, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323119, Length=376, Percent_Identity=28.9893617021277, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324252, Length=414, Percent_Identity=27.0531400966184, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=56.25, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323813, Length=126, Percent_Identity=38.8888888888889, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322194, Length=103, Percent_Identity=37.8640776699029, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320888, Length=98, Percent_Identity=37.7551020408163, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI45552813, Length=373, Percent_Identity=32.7077747989276, Blast_Score=158, Evalue=5e-39, Organism=Drosophila melanogaster, GI45549272, Length=373, Percent_Identity=32.7077747989276, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI45552811, Length=373, Percent_Identity=32.7077747989276, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24646562, Length=351, Percent_Identity=31.6239316239316, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24646560, Length=351, Percent_Identity=31.6239316239316, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24646558, Length=351, Percent_Identity=31.6239316239316, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24646556, Length=351, Percent_Identity=31.6239316239316, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI21357547, Length=351, Percent_Identity=31.6239316239316, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI20129487, Length=343, Percent_Identity=31.7784256559767, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24584014, Length=343, Percent_Identity=31.7784256559767, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI28574949, Length=353, Percent_Identity=26.628895184136, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI85726398, Length=371, Percent_Identity=29.3800539083558, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920464, Length=360, Percent_Identity=26.9444444444444, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI18858081, Length=361, Percent_Identity=28.5318559556787, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24658562, Length=69, Percent_Identity=56.5217391304348, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24658555, Length=69, Percent_Identity=56.5217391304348, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=46.3768115942029, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24654066, Length=74, Percent_Identity=47.2972972972973, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654070, Length=74, Percent_Identity=47.2972972972973, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654068, Length=74, Percent_Identity=47.2972972972973, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654072, Length=74, Percent_Identity=47.2972972972973, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17737735, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24668523, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574723, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI17648033, Length=103, Percent_Identity=37.8640776699029, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24584630, Length=103, Percent_Identity=37.8640776699029, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=48.4848484848485, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 40221; Mature: 40090
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFYDLLGVSRDADADTLKRAYRQQARKYHPDVNKEAGAEDKFKEIGKAYEVLSDSQKR CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHH ARYDQFGEAGIGGAAGMPDMGDMGGFADLFDTFFNGFGGASSAGGSRPQRRGPQQGDDLR HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCEE YDLTIDFDKAIFGQEKEITVPHLETCDVCRGTGAKKGTGPVTCSTCSGAGQVRRATRTPF EEEEEEHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC GSFTQVAECPTCGGTGQVIKDPCNACGGKGVKQVRKKLKINIPAGVDSGTRLRVSGEGNA CCHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEECCCCCCCCCEEEEECCCCC GLKGGPSGDLYVFLKVKNHPNLKRDGLTILSEVNISYLQAILGDTIEIETVDGPTKLQIP CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHCCCEEEEECCCCEEEEEC AGTQPNSILNLENKGVPKLGNPVARGNHQVSVKIKLPTKLSDSERNLLEELAGHYSALGP CCCCCCCEEECCCCCCCCCCCCHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC QHHYHKSGLFSKLFGK CHHHHHHHHHHHHHCC >Mature Secondary Structure ADFYDLLGVSRDADADTLKRAYRQQARKYHPDVNKEAGAEDKFKEIGKAYEVLSDSQKR CCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHH ARYDQFGEAGIGGAAGMPDMGDMGGFADLFDTFFNGFGGASSAGGSRPQRRGPQQGDDLR HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCEE YDLTIDFDKAIFGQEKEITVPHLETCDVCRGTGAKKGTGPVTCSTCSGAGQVRRATRTPF EEEEEEHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC GSFTQVAECPTCGGTGQVIKDPCNACGGKGVKQVRKKLKINIPAGVDSGTRLRVSGEGNA CCHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEECCCCCCCCCEEEEECCCCC GLKGGPSGDLYVFLKVKNHPNLKRDGLTILSEVNISYLQAILGDTIEIETVDGPTKLQIP CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHCCCEEEEECCCCEEEEEC AGTQPNSILNLENKGVPKLGNPVARGNHQVSVKIKLPTKLSDSERNLLEELAGHYSALGP CCCCCCCEEECCCCCCCCCCCCHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC QHHYHKSGLFSKLFGK CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917486 [H]