Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024720

Identifier: 124024720

GI number: 124024720

Start: 10620

End: 11342

Strand: Direct

Name: 124024720

Synonym: NATL1_00071

Alternate gene names: NA

Gene position: 10620-11342 (Clockwise)

Preceding gene: 124024716

Following gene: 124024721

Centisome position: 0.57

GC content: 37.07

Gene sequence:

>723_bases
GTGCAGTCCTCTCCCAAAGAAGATCTTACCCTTGGCTCAAGGCTTCAGCAAGATCTTAAAAATGACCTAATAGCTGGTCT
ATTGGTGGTTATTCCCTTAGCTACCACTATTTGGTTGTCTACAATTGTCAGCCGCTTTGTTTTGGCAATATTAACCTCAA
TACCAAAACAATTAAATCCTTTCATTACTCTTAATCCTTTACTGCAAGACCTTATCAACCTCGCTTTGGGTTTAACTGTT
CCACTACTAGGAATTTTGTTGATAGGTCTCATGGCTAGAAATTTTGTAGGAAGATGGTTGCTTGAGTTTGGCGAAGGAAC
TCTATCTCGAATACCACTTGCGGGATCAGTTTATAAAACTCTTAAACAACTTCTAGAAACTTTTTTAAGAGACAATTCAA
CTAGATTTCGCAGAGTTGTATTAGTTGAATATCCGAGAGAAGGTTTGTTCAGCGTTGGTTTTGTGACTGGTATTGTTGGC
CCATCTCTACAAACGGAACCAAATCAACCTTTGTTGAGTGTTTTTATACCTACTGCACCAAACCCTACAACTGGTTGGTA
TACATTAGTGCCAGAAGACTCTGTTAAAGATTTAGATATATCTGTTGAAGATGCTTTTAGAACCATTATTTCTGCTGGAA
TTGTAAATCCTGATGATAGAAGTAACTCTACAAATACATCTTTTTCTAGTTTATTTTCTCAGTTAAGAGCATCATCTTCG
TAA

Upstream 100 bases:

>100_bases
TTTTGATGTTTTATTTCTATTAATAGCTTAAATTATTCAATTAATGCACTTAATTTGGTTAGATTGAGTATATATATATT
TTTCGGACTCTCTTTATTTG

Downstream 100 bases:

>100_bases
AGCTTTTAGTCATAGTTATGCAATTAAAATCAATTTCCAGAGAATTAGCTCTTTTACTTTTAGGACAAATTAAAAAAAAA
GATATTAATAAATTAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNPFITLNPLLQDLINLALGLTV
PLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKTLKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVG
PSLQTEPNQPLLSVFIPTAPNPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS

Sequences:

>Translated_240_residues
MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNPFITLNPLLQDLINLALGLTV
PLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKTLKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVG
PSLQTEPNQPLLSVFIPTAPNPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS
>Mature_240_residues
MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNPFITLNPLLQDLINLALGLTV
PLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKTLKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVG
PSLQTEPNQPLLSVFIPTAPNPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26311; Mature: 26311

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FITLNPLLQDLINLALGLTVPLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKT
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH
LKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVGPSLQTEPNQPLLSVFIPTAP
HHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
NPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FITLNPLLQDLINLALGLTVPLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKT
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH
LKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVGPSLQTEPNQPLLSVFIPTAP
HHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
NPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA