| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024720
Identifier: 124024720
GI number: 124024720
Start: 10620
End: 11342
Strand: Direct
Name: 124024720
Synonym: NATL1_00071
Alternate gene names: NA
Gene position: 10620-11342 (Clockwise)
Preceding gene: 124024716
Following gene: 124024721
Centisome position: 0.57
GC content: 37.07
Gene sequence:
>723_bases GTGCAGTCCTCTCCCAAAGAAGATCTTACCCTTGGCTCAAGGCTTCAGCAAGATCTTAAAAATGACCTAATAGCTGGTCT ATTGGTGGTTATTCCCTTAGCTACCACTATTTGGTTGTCTACAATTGTCAGCCGCTTTGTTTTGGCAATATTAACCTCAA TACCAAAACAATTAAATCCTTTCATTACTCTTAATCCTTTACTGCAAGACCTTATCAACCTCGCTTTGGGTTTAACTGTT CCACTACTAGGAATTTTGTTGATAGGTCTCATGGCTAGAAATTTTGTAGGAAGATGGTTGCTTGAGTTTGGCGAAGGAAC TCTATCTCGAATACCACTTGCGGGATCAGTTTATAAAACTCTTAAACAACTTCTAGAAACTTTTTTAAGAGACAATTCAA CTAGATTTCGCAGAGTTGTATTAGTTGAATATCCGAGAGAAGGTTTGTTCAGCGTTGGTTTTGTGACTGGTATTGTTGGC CCATCTCTACAAACGGAACCAAATCAACCTTTGTTGAGTGTTTTTATACCTACTGCACCAAACCCTACAACTGGTTGGTA TACATTAGTGCCAGAAGACTCTGTTAAAGATTTAGATATATCTGTTGAAGATGCTTTTAGAACCATTATTTCTGCTGGAA TTGTAAATCCTGATGATAGAAGTAACTCTACAAATACATCTTTTTCTAGTTTATTTTCTCAGTTAAGAGCATCATCTTCG TAA
Upstream 100 bases:
>100_bases TTTTGATGTTTTATTTCTATTAATAGCTTAAATTATTCAATTAATGCACTTAATTTGGTTAGATTGAGTATATATATATT TTTCGGACTCTCTTTATTTG
Downstream 100 bases:
>100_bases AGCTTTTAGTCATAGTTATGCAATTAAAATCAATTTCCAGAGAATTAGCTCTTTTACTTTTAGGACAAATTAAAAAAAAA GATATTAATAAATTAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNPFITLNPLLQDLINLALGLTV PLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKTLKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVG PSLQTEPNQPLLSVFIPTAPNPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS
Sequences:
>Translated_240_residues MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNPFITLNPLLQDLINLALGLTV PLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKTLKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVG PSLQTEPNQPLLSVFIPTAPNPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS >Mature_240_residues MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNPFITLNPLLQDLINLALGLTV PLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKTLKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVG PSLQTEPNQPLLSVFIPTAPNPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26311; Mature: 26311
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FITLNPLLQDLINLALGLTVPLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKT CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH LKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVGPSLQTEPNQPLLSVFIPTAP HHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC NPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MQSSPKEDLTLGSRLQQDLKNDLIAGLLVVIPLATTIWLSTIVSRFVLAILTSIPKQLNP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FITLNPLLQDLINLALGLTVPLLGILLIGLMARNFVGRWLLEFGEGTLSRIPLAGSVYKT CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH LKQLLETFLRDNSTRFRRVVLVEYPREGLFSVGFVTGIVGPSLQTEPNQPLLSVFIPTAP HHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC NPTTGWYTLVPEDSVKDLDISVEDAFRTIISAGIVNPDDRSNSTNTSFSSLFSQLRASSS CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA