| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024718
Identifier: 124024718
GI number: 124024718
Start: 8656
End: 9486
Strand: Reverse
Name: 124024718
Synonym: NATL1_00051
Alternate gene names: NA
Gene position: 9486-8656 (Counterclockwise)
Preceding gene: 124024719
Following gene: 124024717
Centisome position: 0.51
GC content: 26.47
Gene sequence:
>831_bases ATGATGAAGAAAGTTTCAAAAATTTTTAAATATTTACTTGGTCTAAGTCTAATTAATAATTTTTTTATACCTAATTCTTC AGTTGCATTTTTTCCAAGAATTAACGAACCAAATCAGCAAGAATTTGAATCTACTTCAAAGCAAATCGGAAAAACAGCTA AACAGCTAATTCAATTTGGTGAATATAAAGAAGCAATTAAAATTTTAAAGCTTGCATTGAAACTAAATCCTACAGAAGAA ACTCTTTGGACGACCCTTGCAGACGCACAATTTAAGTCAAAAGATAGTAATAATGCATTATTATCATTGGATAAAGTTTT AGTAATAAATCCGAAAAATGCTTCAATATATTTTGCTAAAGGTTCTATATATATGAATTTAAAAAATCTTGAAAATGCAA TTTTAATGCTTAATCAAGGATTATTATTAGATAATAAGAATGAATCAGGCTACTTCCAGCTTGGAAATGCATATATTATG CTAAAAGAATATAAAAAAGCCTTACATACTTATAATAAAGTCACTAAATTAAACCCTAATTTTTGGCAAGTAATTAATAA TCAAGGTCTCATTCTTTATGAAATTAATAAAAAAGATGAAGCTCTTTCAAAATTTAAATTAGCAGCAAAGTTAAGTAATA ATGCTGAGCCTAGACTTGCATTAGCAATTGCAAGCTATTCAATCAAAGGTATATCTATTGAAACATTAAACATAGCAAAA AATGCTTTAATAGATAATCCAAAATATGCTGATATTGAGTATCAATCTGAACAATTATGGGGAAAAAAGTTACAACACTC GGCAAAACTTTTTTTAAAACGAAAGAAATGA
Upstream 100 bases:
>100_bases ATTCAAAATGGAAGGAAAGTTTAAAAAATTCAGCACTAAAAAGAATTAAGCCATGGATGTGGCGTAGGAATATAGATTCA ATATCAAAGAAAAAATAAAA
Downstream 100 bases:
>100_bases AAAAAGTAGTTAGAGAAGCTAGAGAAAAAACTGAATAACTTAATGTTTAACAAAAAACTGGTTTTTAACAAATTAGTTAG TAACCTAAATAAAGAAATTT
Product: TPR-repeat pilus assembly protein TadD
Products: NA
Alternate protein names: TPR-Repeat Pilus Assembly Protein TadD; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Serine/Threonine Protein Kinase; Tetratricopeptide Repeat Protein; Secreted Tetratricopeptide Protein; Serine/Threonine Protein Kinase With TPR Repeats; Tetratricopeptide TPR_2 Repeat Protein; Peptidase; Flp Pilus Assembly Protein TadD TPR Repeat Protein; Flp Pilus Assembly Protein TadD
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAIKILKLALKLNPTEE TLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAKGSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIM LKEYKKALHTYNKVTKLNPNFWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK
Sequences:
>Translated_276_residues MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAIKILKLALKLNPTEE TLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAKGSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIM LKEYKKALHTYNKVTKLNPNFWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK >Mature_276_residues MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAIKILKLALKLNPTEE TLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAKGSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIM LKEYKKALHTYNKVTKLNPNFWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31479; Mature: 31479
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFG CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC EYKEAIKILKLALKLNPTEETLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAK CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCEEEEECEEEEECCCCCEEEEEE GSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIMLKEYKKALHTYNKVTKLNPN CEEEEEHHHHCCEEEEEECCEEEECCCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCH FWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEHHHH NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK HHHCCCCCCCCEEECHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFG CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC EYKEAIKILKLALKLNPTEETLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAK CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCEEEEECEEEEECCCCCEEEEEE GSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIMLKEYKKALHTYNKVTKLNPN CEEEEEHHHHCCEEEEEECCEEEECCCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCH FWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEHHHH NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK HHHCCCCCCCCEEECHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA