Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024718

Identifier: 124024718

GI number: 124024718

Start: 8656

End: 9486

Strand: Reverse

Name: 124024718

Synonym: NATL1_00051

Alternate gene names: NA

Gene position: 9486-8656 (Counterclockwise)

Preceding gene: 124024719

Following gene: 124024717

Centisome position: 0.51

GC content: 26.47

Gene sequence:

>831_bases
ATGATGAAGAAAGTTTCAAAAATTTTTAAATATTTACTTGGTCTAAGTCTAATTAATAATTTTTTTATACCTAATTCTTC
AGTTGCATTTTTTCCAAGAATTAACGAACCAAATCAGCAAGAATTTGAATCTACTTCAAAGCAAATCGGAAAAACAGCTA
AACAGCTAATTCAATTTGGTGAATATAAAGAAGCAATTAAAATTTTAAAGCTTGCATTGAAACTAAATCCTACAGAAGAA
ACTCTTTGGACGACCCTTGCAGACGCACAATTTAAGTCAAAAGATAGTAATAATGCATTATTATCATTGGATAAAGTTTT
AGTAATAAATCCGAAAAATGCTTCAATATATTTTGCTAAAGGTTCTATATATATGAATTTAAAAAATCTTGAAAATGCAA
TTTTAATGCTTAATCAAGGATTATTATTAGATAATAAGAATGAATCAGGCTACTTCCAGCTTGGAAATGCATATATTATG
CTAAAAGAATATAAAAAAGCCTTACATACTTATAATAAAGTCACTAAATTAAACCCTAATTTTTGGCAAGTAATTAATAA
TCAAGGTCTCATTCTTTATGAAATTAATAAAAAAGATGAAGCTCTTTCAAAATTTAAATTAGCAGCAAAGTTAAGTAATA
ATGCTGAGCCTAGACTTGCATTAGCAATTGCAAGCTATTCAATCAAAGGTATATCTATTGAAACATTAAACATAGCAAAA
AATGCTTTAATAGATAATCCAAAATATGCTGATATTGAGTATCAATCTGAACAATTATGGGGAAAAAAGTTACAACACTC
GGCAAAACTTTTTTTAAAACGAAAGAAATGA

Upstream 100 bases:

>100_bases
ATTCAAAATGGAAGGAAAGTTTAAAAAATTCAGCACTAAAAAGAATTAAGCCATGGATGTGGCGTAGGAATATAGATTCA
ATATCAAAGAAAAAATAAAA

Downstream 100 bases:

>100_bases
AAAAAGTAGTTAGAGAAGCTAGAGAAAAAACTGAATAACTTAATGTTTAACAAAAAACTGGTTTTTAACAAATTAGTTAG
TAACCTAAATAAAGAAATTT

Product: TPR-repeat pilus assembly protein TadD

Products: NA

Alternate protein names: TPR-Repeat Pilus Assembly Protein TadD; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Serine/Threonine Protein Kinase; Tetratricopeptide Repeat Protein; Secreted Tetratricopeptide Protein; Serine/Threonine Protein Kinase With TPR Repeats; Tetratricopeptide TPR_2 Repeat Protein; Peptidase; Flp Pilus Assembly Protein TadD TPR Repeat Protein; Flp Pilus Assembly Protein TadD

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAIKILKLALKLNPTEE
TLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAKGSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIM
LKEYKKALHTYNKVTKLNPNFWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK
NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK

Sequences:

>Translated_276_residues
MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAIKILKLALKLNPTEE
TLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAKGSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIM
LKEYKKALHTYNKVTKLNPNFWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK
NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK
>Mature_276_residues
MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAIKILKLALKLNPTEE
TLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAKGSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIM
LKEYKKALHTYNKVTKLNPNFWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK
NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31479; Mature: 31479

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFG
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
EYKEAIKILKLALKLNPTEETLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAK
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCEEEEECEEEEECCCCCEEEEEE
GSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIMLKEYKKALHTYNKVTKLNPN
CEEEEEHHHHCCEEEEEECCEEEECCCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCH
FWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK
HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEHHHH
NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK
HHHCCCCCCCCEEECHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MMKKVSKIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFG
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
EYKEAIKILKLALKLNPTEETLWTTLADAQFKSKDSNNALLSLDKVLVINPKNASIYFAK
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCEEEEECEEEEECCCCCEEEEEE
GSIYMNLKNLENAILMLNQGLLLDNKNESGYFQLGNAYIMLKEYKKALHTYNKVTKLNPN
CEEEEEHHHHCCEEEEEECCEEEECCCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCH
FWQVINNQGLILYEINKKDEALSKFKLAAKLSNNAEPRLALAIASYSIKGISIETLNIAK
HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEHHHH
NALIDNPKYADIEYQSEQLWGKKLQHSAKLFLKRKK
HHHCCCCCCCCEEECHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA