Click here to switch to the map view.

The map label for this gene is 124028498

Identifier: 124028498

GI number: 124028498

Start: 1651127

End: 1651465

Strand: Reverse

Name: 124028498

Synonym: Hbut_1659

Alternate gene names: NA

Gene position: 1651465-1651127 (Counterclockwise)

Preceding gene: 124028499

Following gene: 124028497

Centisome position: 99.06

GC content: 50.15

Gene sequence:

>339_bases
TTGGTCGAAATAGTTGAGTCGAGATATGTGCCTCTCCCCGTTGCTAAAAAGATACTAGAGCAGCACCGGCGGCTCGTGGA
GGAGAATCCTGTTGTTGCACGTGCCTACGATTACCTGGCAAAGTTCTCGAAGTGCGACCCCGATAATGCAGAGGAAGCCT
TTCGCCGCATAGTTGAGATAGGCTTTACAGAATTTGCGGCTGCAATCCTTGTAAACATCGTGCCTGTCGATGTTGAGGAG
GCGAAGGCCATTCTTGGCGACATTGATGGTGGGTATGAGGAGGAGAAAATAGCTAAGGCCCTAGAGGTTTTGAAGGAATA
CTGCCCGGTTGAGAGCTAA

Upstream 100 bases:

>100_bases
TAGGAGCGTGCAGCTACGCGATATCAGCTGTATCTGCATTTTATCCCTCCCATGCAATACGGTTAGAGTTGTTAAGACGT
GAAGCTGTAGGGTGCTAGTC

Downstream 100 bases:

>100_bases
GCGTCCAGCTAAGGCATTCTCTTTAAATCCTTCACGTCTTGCTCTCTTAGTTTCTGGGTGTACCGGCTACTAGCTGGCAT
CTAGTATTGTGGAGAGGGTC

Product: DNA-directed RNA polymerase, subunit F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MVEIVESRYVPLPVAKKILEQHRRLVEENPVVARAYDYLAKFSKCDPDNAEEAFRRIVEIGFTEFAAAILVNIVPVDVEE
AKAILGDIDGGYEEEKIAKALEVLKEYCPVES

Sequences:

>Translated_112_residues
MVEIVESRYVPLPVAKKILEQHRRLVEENPVVARAYDYLAKFSKCDPDNAEEAFRRIVEIGFTEFAAAILVNIVPVDVEE
AKAILGDIDGGYEEEKIAKALEVLKEYCPVES
>Mature_112_residues
MVEIVESRYVPLPVAKKILEQHRRLVEENPVVARAYDYLAKFSKCDPDNAEEAFRRIVEIGFTEFAAAILVNIVPVDVEE
AKAILGDIDGGYEEEKIAKALEVLKEYCPVES

Specific function: Unknown

COG id: COG1460

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12625; Mature: 12625

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIVESRYVPLPVAKKILEQHRRLVEENPVVARAYDYLAKFSKCDPDNAEEAFRRIVEI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GFTEFAAAILVNIVPVDVEEAKAILGDIDGGYEEEKIAKALEVLKEYCPVES
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVEIVESRYVPLPVAKKILEQHRRLVEENPVVARAYDYLAKFSKCDPDNAEEAFRRIVEI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GFTEFAAAILVNIVPVDVEEAKAILGDIDGGYEEEKIAKALEVLKEYCPVES
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA