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The map label for this gene is rps27e

Identifier: 124028480

GI number: 124028480

Start: 1639279

End: 1639479

Strand: Reverse

Name: rps27e

Synonym: Hbut_1641

Alternate gene names: 124028480

Gene position: 1639479-1639279 (Counterclockwise)

Preceding gene: 124028481

Following gene: 124028479

Centisome position: 98.34

GC content: 50.25

Gene sequence:

>201_bases
ATGGTCAGTAAGTTCAAGATACTAGTACCACAGCCGCGTAGCAGGTTCCTCCTAGTGAGATGCCCGGTTTGCGGTAATGA
GCAAGTGATATTCAGCCATGCAACATTCCCAGCGAGATGCCTTGTGTGTGGAGCACAGCTAGTAGAACCAACAGGAGGTA
AGGCTAAGATACTTGGCCAGGTGGTACGTGTCCTAGGCTAA

Upstream 100 bases:

>100_bases
AAGATAGTATTAAAGCTTAAGTGTCAGAAGTGTGGTTACATACTACACCGCCGGGGTATTAGGCTCAAGAAGGTAGAGCT
GGTGGAGGTGAGGCACTAGC

Downstream 100 bases:

>100_bases
GTACTACCGCCTCCTCTAGTCTGGGTTTTAGTCTCAGCTACGGATACGCATCCAATATTTTAGGGCTCCCAGCTCTCTAT
CCAGCTTTCTCGGTGAAACA

Product: 30S ribosomal protein S27e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MVSKFKILVPQPRSRFLLVRCPVCGNEQVIFSHATFPARCLVCGAQLVEPTGGKAKILGQVVRVLG

Sequences:

>Translated_66_residues
MVSKFKILVPQPRSRFLLVRCPVCGNEQVIFSHATFPARCLVCGAQLVEPTGGKAKILGQVVRVLG
>Mature_66_residues
MVSKFKILVPQPRSRFLLVRCPVCGNEQVIFSHATFPARCLVCGAQLVEPTGGKAKILGQVVRVLG

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27_HYPBU (A2BN94)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013800.1
- ProteinModelPortal:   A2BN94
- SMR:   A2BN94
- STRING:   A2BN94
- GeneID:   4781870
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1641
- eggNOG:   arNOG13249
- HOGENOM:   HBG392194
- OMA:   CIDCGNE
- PhylomeDB:   A2BN94
- ProtClustDB:   PRK00415
- BioCyc:   HBUT415426:HBUT_1641-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00371
- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332
- PANTHER:   PTHR11594

Pfam domain/function: PF01667 Ribosomal_S27e; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7165; Mature: 7165

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKFKILVPQPRSRFLLVRCPVCGNEQVIFSHATFPARCLVCGAQLVEPTGGKAKILGQ
CCCCEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHCHHEECCCCCCHHHHHH
VVRVLG
HHHHCC
>Mature Secondary Structure
MVSKFKILVPQPRSRFLLVRCPVCGNEQVIFSHATFPARCLVCGAQLVEPTGGKAKILGQ
CCCCEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHCHHEECCCCCCHHHHHH
VVRVLG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA