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The map label for this gene is 124028472

Identifier: 124028472

GI number: 124028472

Start: 1632100

End: 1632504

Strand: Reverse

Name: 124028472

Synonym: Hbut_1633

Alternate gene names: NA

Gene position: 1632504-1632100 (Counterclockwise)

Preceding gene: 124028473

Following gene: 124028470

Centisome position: 97.92

GC content: 55.56

Gene sequence:

>405_bases
TTGCAGGGTATACGGCTGCTCCTCCGAGGCCTCGTAGAGGGTAGAGCTTGTGCCCCTCTCCTCATAGTTGATAGGAGTAT
ATCGTTTTACGGCGAGGTAGACCCCGATACAGGGGTATTGAAGGGTGTCGGTAGTATAGCTGGCAAAATACTGGTCTTCC
GGGGCTCAAGGGGAAGTACAGTAGGTCCATACATCATGTATGCCCTCCGGCGGAAGGGGCTAGCACCGGCAGGCCTCATT
GTACCCAAGGCTGAGCCCATGCTGGTAGCTGGCGCCGTACTCGCAGAAATCCCGCTAGCTGAAGGCATAACCGAGGAGGA
CATGTCAAGACTTCAAGCTGGTACGAAGGCGATGTTAGAGGTTAAACCACCCCAAGCTATTCTCTCCGCTCCCGCCCAGT
GCTAG

Upstream 100 bases:

>100_bases
CAGCATTCTATCTGCCGAAGAGACATGGAGTCAGGGTGGCCCTATCAACGCTCAAGGAGTTCATAAAGCTCTACGGAGAC
TAGCCCCAGGGGGCTGGGAC

Downstream 100 bases:

>100_bases
TCTGCCTCCTACTCTCACCGTTGGTGCTGCTTCTAGTCTCACGAACCAGCGCAAGTATACGTTCAACCCTTTCAAGCACA
TCGAGTAGGTCCTTTAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MQGIRLLLRGLVEGRACAPLLIVDRSISFYGEVDPDTGVLKGVGSIAGKILVFRGSRGSTVGPYIMYALRRKGLAPAGLI
VPKAEPMLVAGAVLAEIPLAEGITEEDMSRLQAGTKAMLEVKPPQAILSAPAQC

Sequences:

>Translated_134_residues
MQGIRLLLRGLVEGRACAPLLIVDRSISFYGEVDPDTGVLKGVGSIAGKILVFRGSRGSTVGPYIMYALRRKGLAPAGLI
VPKAEPMLVAGAVLAEIPLAEGITEEDMSRLQAGTKAMLEVKPPQAILSAPAQC
>Mature_134_residues
MQGIRLLLRGLVEGRACAPLLIVDRSISFYGEVDPDTGVLKGVGSIAGKILVFRGSRGSTVGPYIMYALRRKGLAPAGLI
VPKAEPMLVAGAVLAEIPLAEGITEEDMSRLQAGTKAMLEVKPPQAILSAPAQC

Specific function: Unknown

COG id: COG1786

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0107 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015928
- InterPro:   IPR002840
- InterPro:   IPR008279
- InterPro:   IPR012016
- InterPro:   IPR020794 [H]

Pfam domain/function: PF01989 DUF126 [H]

EC number: NA

Molecular weight: Translated: 14026; Mature: 14026

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGIRLLLRGLVEGRACAPLLIVDRSISFYGEVDPDTGVLKGVGSIAGKILVFRGSRGST
CCHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHCEEEEEECCCCCC
VGPYIMYALRRKGLAPAGLIVPKAEPMLVAGAVLAEIPLAEGITEEDMSRLQAGTKAMLE
HHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEE
VKPPQAILSAPAQC
ECCCHHHHCCCCCC
>Mature Secondary Structure
MQGIRLLLRGLVEGRACAPLLIVDRSISFYGEVDPDTGVLKGVGSIAGKILVFRGSRGST
CCHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHCEEEEEECCCCCC
VGPYIMYALRRKGLAPAGLIVPKAEPMLVAGAVLAEIPLAEGITEEDMSRLQAGTKAMLE
HHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEE
VKPPQAILSAPAQC
ECCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]