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The map label for this gene is nusG [H]

Identifier: 124028448

GI number: 124028448

Start: 1606216

End: 1606734

Strand: Direct

Name: nusG [H]

Synonym: Hbut_1604

Alternate gene names: 124028448

Gene position: 1606216-1606734 (Clockwise)

Preceding gene: 124028447

Following gene: 124028449

Centisome position: 96.34

GC content: 52.22

Gene sequence:

>519_bases
TTGAGCCAGCCGGCTGAGGAGATACCCGGAGAAGCTAGGAGTGAAGAGCAAGAGAGAAGGCTGCAGCCGAGACTTTACGC
TGTGAGAACCGTAGCGGGCCGTGAGATAGACGTCGCCCTCATAATGGAGCAGCGAGCCAGGGACCAAAATATGCCAATAT
ATGCGATCATAGTCCCCCCACAGATCAAAGGCTACGTTATCGTTGAGACGCCAGCTGCATTCTATGCCACAAATGCTATT
CAGGGCATAAGGTATGCTAAGGGTGTCGTACCAGGTGTGCTAAGGTACGAGGATGTTGAGAGACTACTCAAGCCAAAGGC
AGTAATAGAGACACTAAAGCCTGGCGACATTGTTGAGATCATCTCGGGCCCCTTCCGCGGCATGAAGGGCCAGGTGGTAC
GTGTATCGCCTAGCAAGAATGAGGTAGTTTTAAATGTGCTAGAGGTTGAATACCCACTCCAAATCACGGTGCCAGGTGAC
TCGGTAAGGCCGAGTAAGGAGGAGAGAGGGAGCAGGTAA

Upstream 100 bases:

>100_bases
CACGGCCAAGATAATATGGCTAGCTATACTGCTTGTAGGCTCTGTAGCTTATGTCATACACCTCGTCGCTACACAAGTGG
TAATGGGGGGCTAGTAGGCC

Downstream 100 bases:

>100_bases
TGGGCATCAGAGTTATCAACGTCAAGGTTAGGGGTGGCGAAGCTAAGCCCGCCCCACCACTTGCACCAGCAATCGAGAAG
CTGGGTCTAGACGTAAACAA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSQPAEEIPGEARSEEQERRLQPRLYAVRTVAGREIDVALIMEQRARDQNMPIYAIIVPPQIKGYVIVETPAAFYATNAI
QGIRYAKGVVPGVLRYEDVERLLKPKAVIETLKPGDIVEIISGPFRGMKGQVVRVSPSKNEVVLNVLEVEYPLQITVPGD
SVRPSKEERGSR

Sequences:

>Translated_172_residues
MSQPAEEIPGEARSEEQERRLQPRLYAVRTVAGREIDVALIMEQRARDQNMPIYAIIVPPQIKGYVIVETPAAFYATNAI
QGIRYAKGVVPGVLRYEDVERLLKPKAVIETLKPGDIVEIISGPFRGMKGQVVRVSPSKNEVVLNVLEVEYPLQITVPGD
SVRPSKEERGSR
>Mature_171_residues
SQPAEEIPGEARSEEQERRLQPRLYAVRTVAGREIDVALIMEQRARDQNMPIYAIIVPPQIKGYVIVETPAAFYATNAIQ
GIRYAKGVVPGVLRYEDVERLLKPKAVIETLKPGDIVEIISGPFRGMKGQVVRVSPSKNEVVLNVLEVEYPLQITVPGDS
VRPSKEERGSR

Specific function: Unknown

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR011590
- InterPro:   IPR005100
- InterPro:   IPR006645
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF03439 Supt5 [H]

EC number: NA

Molecular weight: Translated: 19192; Mature: 19060

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPAEEIPGEARSEEQERRLQPRLYAVRTVAGREIDVALIMEQRARDQNMPIYAIIVPP
CCCCCHHCCCCCCCHHHHHHHCCHHEEEEECCCCCEEHEEEEHHHCCCCCCCEEEEEECC
QIKGYVIVETPAAFYATNAIQGIRYAKGVVPGVLRYEDVERLLKPKAVIETLKPGDIVEI
CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEE
ISGPFRGMKGQVVRVSPSKNEVVLNVLEVEYPLQITVPGDSVRPSKEERGSR
CCCCCCCCCCCEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure 
SQPAEEIPGEARSEEQERRLQPRLYAVRTVAGREIDVALIMEQRARDQNMPIYAIIVPP
CCCCHHCCCCCCCHHHHHHHCCHHEEEEECCCCCEEHEEEEHHHCCCCCCCEEEEEECC
QIKGYVIVETPAAFYATNAIQGIRYAKGVVPGVLRYEDVERLLKPKAVIETLKPGDIVEI
CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEE
ISGPFRGMKGQVVRVSPSKNEVVLNVLEVEYPLQITVPGDSVRPSKEERGSR
CCCCCCCCCCCEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1658539; 7711082; 7899076 [H]